Fitness for 5 genes in Agrobacterium fabrum C58

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 953 experiments or choose conditions or try the comparative fitness browser

500 ntAtu1700 and Atu1701 are separated by 300 nucleotidesAtu1701 and Atu1702 are separated by 8 nucleotidesAtu1702 and Atu1703 are separated by 212 nucleotidesAtu1703 and Atu1704 are separated by 99 nucleotides Atu1700: Atu1700 - lipoprotein, at 1,684,808 to 1,686,421 Atu1700 Atu1701: Atu1701 - protein-L-isoaspartate O-methyltransferase, at 1,686,722 to 1,687,363 Atu1701 Atu1702: Atu1702 - stationary-phase survival protein, at 1,687,372 to 1,688,142 Atu1702 Atu1703: Atu1703 - seryl-tRNA synthetase, at 1,688,355 to 1,689,638 Atu1703 Atu1704: Atu1704 - SEC-independent protein translocase protein, at 1,689,738 to 1,690,541 Atu1704
Group Condition Atu1700 Atu1701 Atu1702 Atu1703 Atu1704
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct N.D. -5.9 +0.8 N.D. N.D.
phage AgroPhage_D04 N.D. -3.6 +0.1 N.D. N.D.
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct N.D. -2.6 -0.2 N.D. N.D.
in planta Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. -3.0 +0.3 N.D. N.D.
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. -2.1 -0.6 N.D. N.D.
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI N.D. -1.3 -0.5 N.D. N.D.
stress R2A with m-arsenite 0.8 mM N.D. -1.8 +0.0 N.D. N.D.
stress R2A with Bacitracin 0.6 mM N.D. -1.4 -0.3 N.D. N.D.
stress R2A with cyanide 2.5 mM N.D. -1.4 -0.2 N.D. N.D.
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant N.D. -1.2 -0.3 N.D. N.D.
carbon source methyl-beta-D-xylopyranoside (C) N.D. -1.5 +0.0 N.D. N.D.
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. -1.5 +0.2 N.D. N.D.
phage phage 100.2 N.D. -1.5 +0.3 N.D. N.D.
in planta Plant=Cucumber; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days N.D. -1.2 +0.2 N.D. N.D.
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct N.D. +0.5 -1.2 N.D. N.D.
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct N.D. -0.5 +0.8 N.D. N.D.
no phage P3L5 N.D. +1.0 -0.5 N.D. N.D.
phage AgroPhage_D10 N.D. +1.5 -0.6 N.D. N.D.
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct N.D. +1.5 -0.4 N.D. N.D.
stress R2A with Tetracycline 0.002 mM N.D. +1.2 +0.2 N.D. N.D.
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct N.D. +0.2 +1.2 N.D. N.D.
phage AgroPhage_E04 N.D. +0.8 +0.6 N.D. N.D.
no phage P4L5 N.D. +1.2 +0.2 N.D. N.D.
no phage P4L4 N.D. +1.3 +0.2 N.D. N.D.
phage AgroPhage_F10 N.D. +1.3 +0.2 N.D. N.D.
phage AgroPhage_A07 N.D. +1.4 +0.3 N.D. N.D.
phage AgroPhage_C10 N.D. +2.0 +0.1 N.D. N.D.
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI N.D. +1.9 +0.3 N.D. N.D.
stress R2A with Vancomycin 0.009 mM N.D. +2.1 +0.4 N.D. N.D.
stress R2A with Vancomycin 0.009 mM N.D. +1.8 +0.9 N.D. N.D.
remove
Atu1700
plot		 remove
Atu1701
plot		 remove
Atu1702		 remove
Atu1703
plot		 remove
Atu1704
plot