Fitness for 5 genes in Agrobacterium fabrum C58

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 1014 experiments or choose conditions or try the comparative fitness browser

500 ntAtu1677 and Atu1678 overlap by 1 nucleotidesAtu1678 and Atu1679 are separated by 249 nucleotidesAtu1679 and Atu1680 are separated by 36 nucleotidesAtu1680 and Atu1681 are separated by 29 nucleotides Atu1677: Atu1677 - queuine tRNA-ribosyltransferase, at 1,664,545 to 1,665,675 Atu1677 Atu1678: Atu1678 - S-adenosylmethionine tRNA ribosyltransferase-isomerase, at 1,665,675 to 1,666,775 Atu1678 Atu1679: Atu1679 - peptidyl prolyl cis-trans isomerase, at 1,667,025 to 1,667,534 Atu1679 Atu1680: Atu1680 - peptidyl prolyl cis-trans isomerase, at 1,667,571 to 1,668,140 Atu1680 Atu1681: Atu1681 - phosphopantetheine adenylyltransferase, at 1,668,170 to 1,668,664 Atu1681
Group Condition Atu1677 Atu1678 Atu1679 Atu1680 Atu1681
stress Streptomycin 200 ug/mL -2.9 -1.8 -1.0 -0.9 N.D.
stress R2A with Vancomycin 0.009 mM -3.3 -1.7 +0.3 -0.7 N.D.
stress Streptomycin 200 ug/mL -3.4 -1.3 -0.4 -0.2 N.D.
in planta Plant=Sorghum_Btx_642; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -2.9 -1.0 -0.9 -0.4 N.D.
in planta Plant=Sorghum_X54_243; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -1.9 -0.6 -2.0 -0.5 N.D.
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -1.5 -0.8 -2.2 -0.4 N.D.
stress R2A with Vancomycin 0.009 mM -2.8 -1.6 +0.0 -0.6 N.D.
stress Chloramphenicol 12.5 ug/mL -2.2 -0.9 -1.4 -0.4 N.D.
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -2.5 -0.8 -0.7 -0.6 N.D.
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -2.7 -0.4 -1.2 -0.2 N.D.
in planta Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -1.6 -0.8 -1.3 -0.5 N.D.
in planta Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -2.6 -0.5 -0.7 -0.4 N.D.
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -1.6 -2.2 -0.5 +0.1 N.D.
phage AgroPhage_C10 -0.8 -0.6 -2.7 -0.0 N.D.
stress Hygromycin B 25 ug/mL -1.7 -1.1 -0.7 -0.3 N.D.
stress Chloramphenicol 12.5 ug/mL -1.6 -1.4 -0.6 -0.3 N.D.
no phage P4L5 -1.5 +0.0 -2.1 -0.2 N.D.
stress R2A with Gentamicin 0.00125 mM -1.7 -1.0 -0.6 -0.4 N.D.
carbon source Betanin (C) -1.0 -0.2 -2.5 -0.0 N.D.
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.8 -0.0 -2.7 -0.1 N.D.
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -2.4 -0.2 -1.2 +0.2 N.D.
in planta Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -1.5 -0.8 -1.0 -0.3 N.D.
in planta Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -1.1 -1.4 -0.5 -0.5 N.D.
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -2.1 -1.2 -0.1 +0.3 N.D.
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -2.4 -0.9 +0.3 -0.1 N.D.
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.3 -2.6 +0.3 -0.4 N.D.
lb_wheat LB_wheat -1.4 -1.4 +0.3 -0.3 N.D.
in planta Plant=Sorghum_NK_300; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -1.0 -1.5 +0.7 +0.3 N.D.
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -2.5 +0.2 +1.2 +0.6 N.D.
stress Erythromycin 12.5 ug/mL -1.0 -0.5 +1.3 +0.6 N.D.
remove
Atu1677
plot		 remove
Atu1678
plot		 remove
Atu1679		 remove
Atu1680
plot		 remove
Atu1681
plot