Fitness for 5 genes in Agrobacterium fabrum C58

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	Atu1654	Atu1656	Atu1657	Atu1658	Atu1659
in planta	Plant=Sorghum_Btx_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	-0.4	-0.5	N.D.	+0.1	-0.1
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant	-0.2	+0.3	N.D.	-0.4	-0.3
in planta	Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	-0.0	+0.1	N.D.	+0.5	-0.7
in planta	Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days	+0.3	-0.4	N.D.	-0.2	+0.4
in planta	Plant=Sorghum_X54_243; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	+0.5	-0.3	N.D.	+0.3	-0.3
in planta	Plant=Sorghum_Btx_642; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	+0.3	-0.4	N.D.	+0.4	-0.1
in planta	Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	-0.3	+0.2	N.D.	+0.6	-0.1
in planta	Plant=Sorghum_Btx_642; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	+0.1	+0.6	N.D.	-0.4	-0.0
in planta	Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	+0.1	+0.1	N.D.	+0.7	-0.4
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant	-0.3	+0.9	N.D.	-0.1	+0.0
in planta	Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	+0.3	-0.4	N.D.	+0.6	+0.0
nophagecontrol	No phage control	+0.3	-0.3	N.D.	+0.3	+0.3
in planta	Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days	+0.1	+0.4	N.D.	-0.3	+0.4
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-0.6	+0.4	N.D.	+0.2	+0.6
in planta	Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	+0.4	-0.3	N.D.	+0.9	-0.3
in planta	Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	+0.6	-0.2	N.D.	+0.4	+0.0
phage	AgroPhage_D04	-0.2	+0.5	N.D.	+0.5	+0.1
in planta	Plant=Sorghum_X54_243; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	-0.2	+0.2	N.D.	+0.9	+0.2
no phage	P2L5	+0.4	+0.4	N.D.	-0.2	+0.5
in planta	Plant=Sorghum_Btx_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	+0.3	+0.7	N.D.	-0.0	+0.1
stress	R2A with m-arsenite 0.8 mM	-0.0	+0.8	N.D.	+0.3	-0.0
in planta	Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	+0.0	+0.5	N.D.	+0.5	+0.2
phage	AgroPhage_A07	+0.7	+0.3	N.D.	+0.2	+0.1
in planta	Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	+0.1	+0.4	N.D.	+0.7	+0.1
in planta	Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days	+0.5	+0.4	N.D.	+0.3	+0.2
in planta	Plant=Sorghum_Btx_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	+0.5	+0.4	N.D.	+0.3	+0.3
in planta	Plant=Sorghum_NK_300; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	+0.3	+0.4	N.D.	+0.5	+0.3
nitrogen source	DL-2-Aminobutyric (N)	+0.2	+0.3	N.D.	+0.6	+0.7
stress	R2A with Vancomycin 0.009 mM	+0.0	+0.2	N.D.	+3.8	+0.0
stress	R2A with Vancomycin 0.009 mM	+0.3	+0.0	N.D.	+5.0	+0.3