Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu1631 and Atu1632 are separated by 242 nucleotidesAtu1632 and Atu1633 are separated by 164 nucleotidesAtu1633 and Atu1634 are separated by 283 nucleotidesAtu1634 and Atu1635 are separated by 154 nucleotides Atu1631: Atu1631 - two component response regulator, at 1,616,742 to 1,617,491 Atu1631 Atu1632: Atu1632 - dimethylglycine dehydrogenase, at 1,617,734 to 1,620,247 Atu1632 Atu1633: Atu1633 - potassium efflux system KEFA, at 1,620,412 to 1,622,919 Atu1633 Atu1634: Atu1634 - hypothetical protein, at 1,623,203 to 1,623,457 Atu1634 Atu1635: Atu1635 - tRNA-Lys, at 1,623,612 to 1,623,687 Atu1635
Group Condition Atu1631 Atu1632 Atu1633 Atu1634 Atu1635
nitrogen source Betaine (N) +0.0 -3.7 -0.0 -0.2 N.D.
nitrogen source Betaine (N) -0.2 -3.4 +0.0 +0.3 N.D.
nitrogen source Choline chloride (N) +0.1 -3.4 +0.0 +0.3 N.D.
nitrogen source Choline chloride (N) +0.2 -3.0 +0.0 -0.0 N.D.
in planta Plant=Sorghum_Btx_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.7 -0.3 -0.0 -1.3 N.D.
in planta Plant=Sorghum_NK_300; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.1 -0.5 +0.1 -1.6 N.D.
stress R2A with Tetracycline 0.002 mM -0.2 -0.1 -0.2 -1.2 N.D.
in planta Plant=Sorghum_X54_243; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.0 +0.1 +0.0 -1.8 N.D.
nitrogen source DL-2-Aminobutyric (N) -0.4 +0.1 +0.1 -1.4 N.D.
in planta Plant=Sorghum_NK_300; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.0 -0.3 -0.1 -1.3 N.D.
carbon source D-Saccharic potassium salt (C) +0.1 -0.0 +0.1 -1.8 N.D.
carbon source Methyl alpha-D-glucopyranoside (C) -0.2 -0.1 +0.2 -1.4 N.D.
phage AgroPhage_F10 +0.2 +0.1 -0.1 -1.4 N.D.
in planta Plant=Sorghum_Btx_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.5 -0.8 +0.0 -0.6 N.D.
in planta Plant=Sorghum_Btx_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.4 -0.2 +0.1 -1.0 N.D.
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.2 -0.1 +0.2 -1.1 N.D.
phage AgroPhage_D07 +0.3 -0.1 +0.2 -1.1 N.D.
in planta Plant=Sorghum_Btx_642; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.4 -0.3 +0.4 -0.9 N.D.
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.0 -0.7 +0.3 +0.7 N.D.
in planta Plant=Sorghum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.0 -0.4 -0.3 +1.0 N.D.
in planta Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.7 +0.2 +0.1 -0.7 N.D.
in planta Plant=Sorghum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.2 -0.5 -0.3 +0.9 N.D.
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +1.0 -0.1 +0.3 -0.7 N.D.
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.2 -0.5 +0.5 +1.1 N.D.
phage phage 95.1 -0.1 -0.1 +0.0 +1.5 N.D.
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.3 -0.1 +0.3 +0.9 N.D.
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.8 -0.2 +0.4 +0.6 N.D.
in planta Plant=Arabidopsis_efr; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.1 +0.1 +0.0 +1.4 N.D.
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.2 -0.4 +0.3 +1.9 N.D.
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +1.2 +0.2 +0.3 -0.0 N.D.
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