Fitness for 5 genes in Agrobacterium fabrum C58

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	Atu1630	Atu1631	Atu1632	Atu1633	Atu1634
nitrogen source	Betaine (N)	-0.0	+0.0	-3.7	-0.0	-0.2
nitrogen source	Betaine (N)	-0.0	-0.2	-3.4	+0.0	+0.3
nitrogen source	Choline chloride (N)	-0.1	+0.2	-3.0	+0.0	-0.0
nitrogen source	Choline chloride (N)	+0.1	+0.1	-3.4	+0.0	+0.3
nitrogen source	DL-2-Aminobutyric (N)	-0.4	-0.4	+0.1	+0.1	-1.4
in planta	Plant=Sorghum_Btx_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	+0.3	-0.7	-0.3	-0.0	-1.3
stress	R2A with Tetracycline 0.002 mM	-0.1	-0.2	-0.1	-0.2	-1.2
in planta	Plant=Sorghum_X54_243; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	-0.1	+0.0	+0.1	+0.0	-1.8
in planta	Plant=Sorghum_NK_300; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	+0.3	-0.1	-0.5	+0.1	-1.6
carbon source	D-Saccharic potassium salt (C)	+0.1	+0.1	-0.0	+0.1	-1.8
carbon source	Methyl alpha-D-glucopyranoside (C)	-0.0	-0.2	-0.1	+0.2	-1.4
phage	AgroPhage_F10	+0.1	+0.2	+0.1	-0.1	-1.4
in planta	Plant=Sorghum_Btx_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	+0.0	+0.5	-0.8	+0.0	-0.6
phage	AgroPhage_D07	-0.2	+0.3	-0.1	+0.2	-1.1
in planta	Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days	-0.1	+0.2	-0.1	+0.2	-1.1
in planta	Plant=Sorghum_Btx_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	+0.0	+0.4	-0.2	+0.1	-1.0
in planta	Plant=Sorghum_Btx_642; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	+0.2	+0.4	-0.3	+0.4	-0.9
in planta	Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	-0.1	-0.0	-0.7	+0.3	+0.7
in planta	Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	+0.1	+0.7	+0.2	+0.1	-0.7
in planta	Plant=Sorghum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days	+0.2	+0.2	-0.5	-0.3	+0.9
in planta	Plant=Sorghum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days	+0.3	+0.0	-0.4	-0.3	+1.0
in planta	Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	+0.3	+1.0	-0.1	+0.3	-0.7
in planta	Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	-0.0	+0.2	-0.5	+0.5	+1.1
agar plate interaction control	Parafilmed volatile agar plate with no fungus	+0.0	+0.3	-0.1	+0.3	+0.9
phage	phage 95.1	+0.3	-0.1	-0.1	+0.0	+1.5
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	+0.1	-0.2	-0.4	+0.3	+1.9
in planta	Plant=Arabidopsis_efr; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days	+0.2	+0.1	+0.1	+0.0	+1.4
in planta	Plant=Sorghum_Btx_642; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	+0.6	+0.0	-0.1	+0.0	+1.2
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	+0.3	+0.8	-0.2	+0.4	+0.6
in planta	Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days	+0.2	+1.2	+0.2	+0.3	-0.0