Fitness for 5 genes in Agrobacterium fabrum C58

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 953 experiments or choose conditions or try the comparative fitness browser

500 ntAtu1597 and Atu1599 are separated by 208 nucleotidesAtu1599 and Atu1600 are separated by 89 nucleotidesAtu1600 and Atu1601 are separated by 114 nucleotidesAtu1601 and Atu1602 are separated by 213 nucleotides Atu1597: Atu1597 - 3-oxoacyl-(acyl-carrier-protein) synthase II, at 1,579,602 to 1,580,798 Atu1597 Atu1599: Atu1599 - (3R)-Hydroxymyristoyl-(acyl carrier protein)- Dehydratase, at 1,581,007 to 1,581,486 Atu1599 Atu1600: Atu1600 - acyl carrier protein, at 1,581,576 to 1,581,860 Atu1600 Atu1601: Atu1601 - oxygen-independent coproporphyrinogen III oxidase, at 1,581,975 to 1,583,324 Atu1601 Atu1602: Atu1602 - transcriptional activator, Crp family, at 1,583,538 to 1,584,263 Atu1602
Group Condition Atu1597 Atu1599 Atu1600 Atu1601 Atu1602
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days N.D. N.D. N.D. -0.6 -1.9
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=1days N.D. N.D. N.D. -1.0 -1.5
in planta Plant=Tomato; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days N.D. N.D. N.D. -0.4 -1.8
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days N.D. N.D. N.D. -0.5 -1.6
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct N.D. N.D. N.D. -0.7 -1.3
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days N.D. N.D. N.D. -0.6 -1.4
in planta Plant=Cucumber; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days N.D. N.D. N.D. -0.5 -1.4
no phage P4L4 N.D. N.D. N.D. -0.6 -1.3
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=1days N.D. N.D. N.D. -0.6 -1.2
phage Phage 100.2 + bactiera N.D. N.D. N.D. -0.6 -1.2
phage Phage 100.2 + bactiera N.D. N.D. N.D. -0.5 -1.4
carbon source Supernatant; Agrobacterium rhizogenes K599 grown in Agro_defined_trehalose (5 mM 3-keto-trehalose) (C) N.D. N.D. N.D. -0.7 -1.1
phage Phage 99.2 + bacteria N.D. N.D. N.D. -0.6 -1.2
lb_arabidopsis_leaf LB_arabidopsis_leaf N.D. N.D. N.D. -0.7 -1.1
in planta Plant=Cucumber; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days N.D. N.D. N.D. -0.7 -1.1
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days N.D. N.D. N.D. -0.4 -1.3
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=1days N.D. N.D. N.D. -0.3 -1.5
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days N.D. N.D. N.D. -0.4 -1.3
phage Phage 100.1 + bacteria N.D. N.D. N.D. -0.5 -1.2
carbon source Supernatant; Agrobacterium rhizogenes K599 grown in Agro_defined_trehalose (5 mM 3-keto-trehalose) (C) N.D. N.D. N.D. -0.8 -0.9
phage AgroPhage_H10 N.D. N.D. N.D. +1.3 +0.5
stress R2A with Manganese (II) chloride tetrahydrate 5 mM N.D. N.D. N.D. +0.9 +0.9
phage AgroPhage_E04 N.D. N.D. N.D. +1.3 +0.5
phage AgroPhage_F04 N.D. N.D. N.D. +1.3 +0.7
phage AgroPhage_D07 N.D. N.D. N.D. +0.9 +1.1
phage AgroPhage_E10 N.D. N.D. N.D. +1.4 +1.1
stress R2A with m-arsenite 0.8 mM N.D. N.D. N.D. +1.2 +1.7
stress R2A with m-arsenite 0.8 mM N.D. N.D. N.D. +1.3 +1.7
phage AgroPhage_C10 N.D. N.D. N.D. +2.1 +3.0
phage AgroPhage_C04 N.D. N.D. N.D. +2.1 +3.2
remove
Atu1597
plot		 remove
Atu1599
plot		 remove
Atu1600		 remove
Atu1601
plot		 remove
Atu1602
plot