Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu1569 and Atu1570 are separated by 55 nucleotidesAtu1570 and Atu1571 are separated by 6 nucleotidesAtu1571 and Atu1572 are separated by 200 nucleotidesAtu1572 and Atu1573 are separated by 170 nucleotides Atu1569: Atu1569 - cytochrome P450, at 1,555,607 to 1,557,001 Atu1569 Atu1570: Atu1570 - hypothetical protein, at 1,557,057 to 1,557,374 Atu1570 Atu1571: Atu1571 - serine acetyltransferase, at 1,557,381 to 1,558,205 Atu1571 Atu1572: Atu1572 - hydrolase, at 1,558,406 to 1,559,182 Atu1572 Atu1573: Atu1573 - hypothetical protein, at 1,559,353 to 1,559,598 Atu1573
Group Condition Atu1569 Atu1570 Atu1571 Atu1572 Atu1573
phage phage 99.2 -0.2 -2.5 N.D. -1.1 -0.9
lb_arabidopsis_leaf LB_arabidopsis_leaf +0.1 -3.7 N.D. +0.2 -0.7
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.2 -3.4 N.D. -0.1 -0.4
carbon source Ribitol (C) -0.0 -1.9 N.D. -1.5 -0.3
phage AgroPhage_E04 +0.2 -3.3 N.D. +0.0 -0.6
phage phage 95.1 -0.2 -2.8 N.D. -0.2 -0.5
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=5days +0.2 -2.4 N.D. -0.1 -1.3
in planta Plant=Arabidopsis_efr; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.1 -2.5 N.D. -0.1 -1.0
carbon source D-Raffinose (C) -0.0 -2.1 N.D. -1.1 -0.3
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.1 -0.0 N.D. -0.5 -2.9
in planta Plant=Sorghum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=5days +0.2 -2.5 N.D. -0.0 -0.8
phage AgroPhage_C10 -0.3 -3.4 N.D. -0.2 +0.7
carbon source D-Cellobiose (C) +0.0 -1.0 N.D. -2.2 +0.1
in planta Plant=Sorghum_Btx_642; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.1 -3.1 N.D. -0.1 +0.2
phage AgroPhage_H03 +0.1 -1.8 N.D. +0.3 -1.2
in planta Plant=Sorghum_Btx_642; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.2 +0.6 N.D. -0.6 -2.1
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.2 -2.3 N.D. -0.1 +0.8
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.1 -2.2 N.D. +0.1 +0.9
carbon source D-(+)-Turanose (C) +0.2 -0.8 N.D. -1.6 +1.0
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.2 -2.2 N.D. +0.2 +1.0
no phage P3L5 +0.0 +1.2 N.D. +0.4 -2.2
carbon source D-(+)-melezitose (C) +0.1 -1.5 N.D. -0.3 +1.4
carbon source D-Galactose (C) +0.0 +1.3 N.D. -1.9 +0.4
carbon source L-ascorbate (C) +0.3 -0.4 N.D. -1.4 +1.5
carbon source L-ascorbate (C) +0.1 +0.8 N.D. -1.5 +1.7
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.2 +2.5 N.D. -0.6 -0.0
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.2 +0.4 N.D. -0.3 +2.7
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.0 -0.5 N.D. +0.0 +3.7
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.1 +1.6 N.D. +0.1 +1.8
in planta Plant=Sorghum_SS_20; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.2 +0.5 N.D. -0.4 +4.8
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