Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu1559 and Atu1560 are separated by 123 nucleotidesAtu1560 and Atu1561 are separated by 23 nucleotidesAtu1561 and Atu1562 overlap by 1 nucleotidesAtu1562 and Atu1563 are separated by 82 nucleotides Atu1559: Atu1559 - hypothetical protein, at 1,546,526 to 1,546,984 Atu1559 Atu1560: Atu1560 - phytoene synthase, at 1,547,108 to 1,547,953 Atu1560 Atu1561: Atu1561 - hypothetical protein, at 1,547,977 to 1,548,369 Atu1561 Atu1562: Atu1562 - protein-export membrane protein SECD, at 1,548,369 to 1,550,942 Atu1562 Atu1563: Atu1563 - preprotein tranlocase protein, at 1,551,025 to 1,551,372 Atu1563
Group Condition Atu1559 Atu1560 Atu1561 Atu1562 Atu1563
in planta Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -1.3 N.D. N.D. N.D. N.D.
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -1.0 N.D. N.D. N.D. N.D.
in planta Plant=Sorghum_X54_243; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.9 N.D. N.D. N.D. N.D.
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.9 N.D. N.D. N.D. N.D.
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.9 N.D. N.D. N.D. N.D.
lb_maize LB_Maize -0.8 N.D. N.D. N.D. N.D.
in planta Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.8 N.D. N.D. N.D. N.D.
stress Nerol 1.25 mM -0.7 N.D. N.D. N.D. N.D.
in planta Plant=Lettuce; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.7 N.D. N.D. N.D. N.D.
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.7 N.D. N.D. N.D. N.D.
lb_tobacco_leaf LB_Tobacco_Leaf +0.7 N.D. N.D. N.D. N.D.
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.7 N.D. N.D. N.D. N.D.
stress R2A with Chlorite 0.2 mM +0.7 N.D. N.D. N.D. N.D.
stress R2A with Nickel (II) chloride 0.05 mM +0.7 N.D. N.D. N.D. N.D.
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days +0.7 N.D. N.D. N.D. N.D.
lb_tobacco_leaf LB_Tobacco_Leaf +0.7 N.D. N.D. N.D. N.D.
in planta Plant=Sorghum_Btx_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.7 N.D. N.D. N.D. N.D.
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.7 N.D. N.D. N.D. N.D.
in planta Plant=Sorghum_NK_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.7 N.D. N.D. N.D. N.D.
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.7 N.D. N.D. N.D. N.D.
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.8 N.D. N.D. N.D. N.D.
phage AgroPhage_E04 +0.8 N.D. N.D. N.D. N.D.
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.8 N.D. N.D. N.D. N.D.
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.8 N.D. N.D. N.D. N.D.
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.8 N.D. N.D. N.D. N.D.
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days +0.9 N.D. N.D. N.D. N.D.
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.9 N.D. N.D. N.D. N.D.
phage AgroPhage_F10 +0.9 N.D. N.D. N.D. N.D.
phage AgroPhage_D04 +1.0 N.D. N.D. N.D. N.D.
nitrogen source DL-2-Aminobutyric (N) +1.3 N.D. N.D. N.D. N.D.
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