Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu1539 and Atu1540 overlap by 4 nucleotidesAtu1540 and Atu1541 overlap by 4 nucleotidesAtu1541 and Atu1542 are separated by 55 nucleotidesAtu1542 and Atu1544 are separated by 501 nucleotides Atu1539: Atu1539 - sulfate permease, at 1,528,866 to 1,530,479 Atu1539 Atu1540: Atu1540 - hypothetical protein, at 1,530,476 to 1,531,093 Atu1540 Atu1541: Atu1541 - hypothetical protein, at 1,531,090 to 1,533,165 Atu1541 Atu1542: Atu1542 - Bifunctional adenosylcobalamin biosynthesis protein cobP, at 1,533,221 to 1,533,742 Atu1542 Atu1544: Atu1544 - hypothetical protein, at 1,534,244 to 1,534,936 Atu1544
Group Condition Atu1539 Atu1540 Atu1541 Atu1542 Atu1544
carbon source Propan-1-ol (C) -0.0 -0.1 +0.0 -5.4 +0.0
carbon source Propan-1-ol (C) -0.0 +0.3 +0.0 -3.4 +0.1
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.0 +0.0 -0.1 -1.5 -0.9
carbon source NAG (C) +0.0 +0.1 +0.0 -2.5 -0.0
stress R2A with Calcium Chloride Dihydrate 87.5 mM -0.2 +0.0 -0.0 -1.9 -0.2
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.3 +0.1 +0.1 -2.5 -0.2
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.3 +0.2 -0.0 -1.2 -0.8
in planta Plant=Sorghum_X54_243; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.6 -0.2 +0.0 -1.2 -0.0
carbon source L-Fucose (C) -0.2 -0.0 -0.0 -1.7 -0.2
stress R2A with Calcium Chloride Dihydrate 87.5 mM -0.1 +0.3 -0.1 -2.0 -0.1
carbon source NAG (C) +0.1 -0.1 +0.0 -2.1 +0.0
nitrogen source Glycine (N) -0.1 -0.3 -0.0 -1.5 -0.1
stress R2A with m-arsenite 0.8 mM +0.1 -0.1 +0.0 +0.1 -2.0
stress R2A with m-arsenite 0.8 mM +0.1 -0.0 +0.0 +0.1 -1.9
lb LB -0.1 +0.0 -0.1 -1.6 +0.1
stress R2A with Chlorate 400 mM -0.0 -0.0 +0.1 -1.7 -0.0
stress R2A with Chloride 700 mM -0.0 -0.1 +0.0 -1.8 +0.2
carbon source m-Inositol (C) +0.3 -0.0 -0.0 -1.9 +0.1
stress R2A with Strontium chloride 750 mM -0.1 -0.2 -0.0 -1.6 +0.4
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.0 -0.1 +0.2 -1.2 -0.4
stress R2A with hypochlorite 6.25 mM +0.0 +0.1 +0.1 -1.3 -0.4
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.5 -0.3 +0.1 -1.3 -0.3
carbon source Gentibiose (C) +0.0 -0.0 -0.1 -1.6 +0.3
carbon source D-Galacturonic Acid (C) +0.1 +0.1 +0.1 -1.7 +0.2
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.2 -0.1 +0.2 -1.0 -0.6
carbon source Ribitol (C) +0.3 +0.0 +0.1 -1.5 +0.0
stress R2A with Aluminum chloride 0.3 mM -0.2 +0.2 +0.3 -1.3 -0.1
carbon source Stachyose (C) +0.2 -0.1 -0.1 -1.4 +0.3
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.3 +0.2 +0.5 -0.9 -0.2
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.6 +0.2 -0.1 -0.9 +0.2
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