Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu1532 and Atu1533 are separated by 16 nucleotidesAtu1533 and Atu1534 are separated by 48 nucleotidesAtu1534 and Atu1535 are separated by 3 nucleotidesAtu1535 and Atu1536 are separated by 12 nucleotides Atu1532: Atu1532 - glyoxalase/bleomycin resistance protein/dioxygenase superfamily protein, at 1,524,256 to 1,524,612 Atu1532 Atu1533: Atu1533 - glyoxalase/bleomycin resistance protein/dioxygenase superfamily protein, at 1,524,629 to 1,525,075 Atu1533 Atu1534: Atu1534 - cytochrome-c oxidase, FixP chain, at 1,525,124 to 1,525,987 Atu1534 Atu1535: Atu1535 - cytochrome c oxidase, FixQ chain, at 1,525,991 to 1,526,143 Atu1535 Atu1536: Atu1536 - cytochrome C oxidase, FixO chain, at 1,526,156 to 1,526,887 Atu1536
Group Condition Atu1532 Atu1533 Atu1534 Atu1535 Atu1536
in planta Plant=Cucumber; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days N.D. +0.1 -1.5 -2.0 -1.9
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=1days N.D. +0.2 -1.5 -2.3 -1.6
no phage P1L5 N.D. +0.3 -1.8 -1.9 -1.7
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days N.D. +0.2 -1.3 -2.4 -1.5
lb_arabidopsis_root LB_Arabidopsis_root N.D. -0.0 -0.8 -2.4 -1.5
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days N.D. +0.3 -1.0 -2.3 -1.2
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=1days N.D. +0.1 -1.0 -2.2 -1.1
lb_arabidopsis_leaf LB_arabidopsis_leaf N.D. -0.0 -1.0 -1.6 -1.5
phage AgroPhage_H03 N.D. -0.1 -0.9 -1.2 -1.9
in planta Plant=Tomato; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days N.D. +0.2 -1.4 -1.4 -1.3
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days N.D. +0.1 -1.3 -1.8 -1.1
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=1days N.D. +0.2 -0.8 -2.3 -1.0
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days N.D. +0.1 -1.1 -1.3 -1.5
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=1days N.D. +0.1 -0.6 -2.3 -0.9
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. -0.2 -1.0 -1.3 -1.1
no phage P3L5 N.D. +0.1 -0.9 -1.7 -0.9
in planta Plant=Tomato; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days N.D. +0.2 -1.1 -1.2 -1.4
no phage P5L5 N.D. +0.4 -1.3 -1.3 -1.1
no phage P2L5 N.D. +0.3 -1.4 -1.9 -0.4
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days N.D. +0.2 -1.0 -1.4 -1.1
lb_arabidopsis_root LB_Arabidopsis_root N.D. +0.1 -1.2 -1.1 -1.0
no phage P1L4 N.D. +0.3 -1.1 -1.6 -0.6
no phage P4L5 N.D. +0.2 -1.3 -1.1 -0.8
phage AgroPhage_F10 N.D. -0.0 +1.3 -0.9 +2.3
nophagecontrol No phage control N.D. -0.4 +0.9 +1.7 +0.9
nophagecontrol No phage control N.D. -0.0 +1.0 +0.9 +2.0
stress R2A with m-arsenite 0.8 mM N.D. -0.0 +1.2 +1.5 +1.2
stress R2A with m-arsenite 0.8 mM N.D. -0.4 +1.5 +1.6 +1.8
phage AgroPhage_C04 N.D. +0.3 +3.0 +2.1 +3.4
phage AgroPhage_C10 N.D. +0.2 +2.8 +3.1 +3.2
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