Fitness for 5 genes in Agrobacterium fabrum C58

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 1014 experiments or choose conditions or try the comparative fitness browser

500 ntAtu1505 and Atu1506 are separated by 83 nucleotidesAtu1506 and Atu1507 are separated by 96 nucleotidesAtu1507 and Atu1508 are separated by 289 nucleotidesAtu1508 and Atu1509 are separated by 132 nucleotides Atu1505: Atu1505 - penicillin-binding protein, at 1,494,021 to 1,495,520 Atu1505 Atu1506: Atu1506 - hypothetical protein, at 1,495,604 to 1,495,864 Atu1506 Atu1507: Atu1507 - DNA gyrase subunit A, at 1,495,961 to 1,498,681 Atu1507 Atu1508: Atu1508 - hypothetical protein, at 1,498,971 to 1,499,600 Atu1508 Atu1509: Atu1509 - hypothetical protein, at 1,499,733 to 1,500,881 Atu1509
Group Condition Atu1505 Atu1506 Atu1507 Atu1508 Atu1509
phage AgroPhage_C10 N.D. N.D. N.D. -2.3 -0.1
in planta Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days N.D. N.D. N.D. -0.7 -0.6
Atjh15 N.D. N.D. N.D. -0.9 -0.3
nitrogen source L-Arginine (N) N.D. N.D. N.D. -1.0 -0.1
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct N.D. N.D. N.D. -1.4 +0.4
in planta Plant=Sorghum_Btx_642; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. N.D. N.D. -1.0 +0.0
in planta Plant=Sorghum_Btx_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. N.D. N.D. -0.7 -0.2
nitrogen source L-Arginine (N) N.D. N.D. N.D. -0.8 -0.1
in planta Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. N.D. N.D. -0.5 -0.4
phage phage 99.2 N.D. N.D. N.D. -0.5 -0.3
phage AgroPhage_A05 N.D. N.D. N.D. -0.3 -0.4
phage phage 100.2 N.D. N.D. N.D. -0.6 -0.2
in planta Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days N.D. N.D. N.D. -0.7 -0.1
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct N.D. N.D. N.D. -0.6 +0.5
in planta Plant=Sorghum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days N.D. N.D. N.D. +0.4 -0.4
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=5days N.D. N.D. N.D. +0.5 -0.4
in planta Plant=Sorghum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=5days N.D. N.D. N.D. +0.6 -0.4
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct N.D. N.D. N.D. +0.5 -0.3
no phage P3L4 N.D. N.D. N.D. -0.3 +0.5
Atjh14 N.D. N.D. N.D. +0.6 -0.2
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct N.D. N.D. N.D. +0.7 -0.2
in planta Plant=Sorghum_NK_300; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. N.D. N.D. +0.8 -0.1
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant N.D. N.D. N.D. +0.1 +0.7
stress Chloramphenicol 12.5 ug/mL N.D. N.D. N.D. +0.2 +0.6
stress Timentin 6.25 ug/mL N.D. N.D. N.D. +0.5 +0.3
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. N.D. N.D. +0.4 +0.5
stress Chloramphenicol 12.5 ug/mL N.D. N.D. N.D. +0.8 +0.3
no phage P2L5 N.D. N.D. N.D. +0.6 +0.5
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct N.D. N.D. N.D. +0.9 +0.3
nitrogen source DL-2-Aminobutyric (N) N.D. N.D. N.D. +0.8 +0.5
remove
Atu1505
plot		 remove
Atu1506
plot		 remove
Atu1507		 remove
Atu1508
plot		 remove
Atu1509
plot