Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu1503 and Atu8090 are separated by 416 nucleotidesAtu8090 and Atu1505 are separated by 138 nucleotidesAtu1505 and Atu1506 are separated by 83 nucleotidesAtu1506 and Atu1507 are separated by 96 nucleotides Atu1503: Atu1503 - hypothetical protein, at 1,492,519 to 1,492,746 Atu1503 Atu8090: Atu8090 - hypothetical protein, at 1,493,163 to 1,493,882 Atu8090 Atu1505: Atu1505 - penicillin-binding protein, at 1,494,021 to 1,495,520 Atu1505 Atu1506: Atu1506 - hypothetical protein, at 1,495,604 to 1,495,864 Atu1506 Atu1507: Atu1507 - DNA gyrase subunit A, at 1,495,961 to 1,498,681 Atu1507
Group Condition Atu1503 Atu8090 Atu1505 Atu1506 Atu1507
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -4.8 +0.1 N.D. N.D. N.D.
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -3.2 -0.0 N.D. N.D. N.D.
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -3.3 +0.3 N.D. N.D. N.D.
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -2.9 -0.1 N.D. N.D. N.D.
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -2.9 +0.1 N.D. N.D. N.D.
in planta Plant=Sorghum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -2.3 -0.1 N.D. N.D. N.D.
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -2.5 +0.2 N.D. N.D. N.D.
carbon source D-Saccharic potassium salt (C) -2.6 +0.4 N.D. N.D. N.D.
in planta Plant=Arabidopsis_efr; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -1.9 -0.2 N.D. N.D. N.D.
in planta Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -2.5 +0.5 N.D. N.D. N.D.
carbon source methyl-alpha-D-xylopyranoside (C) -1.9 -0.0 N.D. N.D. N.D.
stress tannic 1 mM -2.0 +0.0 N.D. N.D. N.D.
phage Phage 99.2 + bacteria -1.7 -0.2 N.D. N.D. N.D.
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -2.4 +0.6 N.D. N.D. N.D.
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -1.8 +0.1 N.D. N.D. N.D.
in planta Plant=Sorghum_Btx_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -1.5 -0.3 N.D. N.D. N.D.
in planta Plant=Sorghum_Btx_642; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -1.8 +0.2 N.D. N.D. N.D.
in planta Plant=Sorghum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=5days -1.7 +0.0 N.D. N.D. N.D.
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=5days -1.4 -0.2 N.D. N.D. N.D.
nitrogen source L-Asparagine (N) -1.5 -0.0 N.D. N.D. N.D.
in planta Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -1.8 +0.3 N.D. N.D. N.D.
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -1.6 +0.3 N.D. N.D. N.D.
phage AgroPhage_A01 -1.3 +0.2 N.D. N.D. N.D.
in planta Plant=Tomato; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -1.3 +0.2 N.D. N.D. N.D.
in planta Plant=Sorghum_NK_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -1.3 +0.2 N.D. N.D. N.D.
in planta Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -1.2 +0.3 N.D. N.D. N.D.
agar plate interaction control Parafilmed volatile agar plate with no fungus -1.1 +0.8 N.D. N.D. N.D.
phage AgroPhage_C04 +1.3 -0.2 N.D. N.D. N.D.
phage AgroPhage_E10 +1.4 -0.3 N.D. N.D. N.D.
stress R2A with Chlorite 0.2 mM +1.4 +0.0 N.D. N.D. N.D.
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