Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu1487 and Atu1488 are separated by 175 nucleotidesAtu1488 and Atu1489 are separated by 177 nucleotidesAtu1489 and Atu1490 are separated by 13 nucleotidesAtu1490 and Atu1491 are separated by 2 nucleotides Atu1487: Atu1487 - hypothetical protein, at 1,476,980 to 1,477,546 Atu1487 Atu1488: Atu1488 - IS30 family transposase, at 1,477,722 to 1,478,723 Atu1488 Atu1489: Atu1489 - arsenical resistance protein, at 1,478,901 to 1,479,590 Atu1489 Atu1490: Atu1490 - arsenate reductase, at 1,479,604 to 1,480,026 Atu1490 Atu1491: Atu1491 - sodium bile acid symporter family protein, at 1,480,029 to 1,481,087 Atu1491
Group Condition Atu1487 Atu1488 Atu1489 Atu1490 Atu1491
stress R2A with m-arsenite 0.8 mM +0.1 N.D. -5.6 -4.8 -4.8
stress R2A with m-arsenite 0.8 mM +0.1 N.D. -3.7 -6.1 -3.8
stress R2A with arsenate 50 mM +0.1 N.D. -1.1 -2.2 -4.5
stress R2A with arsenate 50 mM +0.1 N.D. -0.7 -2.0 -3.9
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.2 N.D. -0.5 -1.3 -0.5
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.1 N.D. -0.4 -1.3 -0.6
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.1 N.D. -0.4 -0.6 -0.8
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.2 N.D. -0.2 -1.2 -0.2
in planta Bethi_Library_OD0.01 -0.3 N.D. -0.2 -0.8 -0.1
stress R2A with Vancomycin 0.009 mM -0.1 N.D. -0.6 -0.9 +0.2
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.1 N.D. -0.1 -0.4 -0.9
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.1 N.D. +0.3 -1.1 -0.3
phage AgroPhage_B07 -0.1 N.D. -0.4 +0.6 -1.0
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.2 N.D. +0.4 -0.8 -0.2
phage AgroPhage_B01 -0.1 N.D. +0.0 +0.6 -0.7
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.4 N.D. -0.1 -0.3 +0.7
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.1 N.D. -0.2 +1.4 -0.9
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.4 N.D. -0.1 -0.9 +0.9
in planta Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.5 N.D. +0.1 +0.8 +0.3
nophagecontrol No phage control +0.4 N.D. -0.4 +0.6 +0.4
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.4 N.D. -0.2 +0.8 -0.1
carbon source D-Saccharic potassium salt (C) -0.3 N.D. +0.0 +0.6 +0.8
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.1 N.D. +0.8 +0.6 -0.5
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.4 N.D. +0.3 +1.4 -0.3
stress Chloramphenicol 12.5 ug/mL +0.5 N.D. -0.1 +0.9 -0.0
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.1 N.D. +0.2 +0.7 +0.6
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.5 N.D. +0.3 +0.6 +0.0
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.4 N.D. +0.1 +1.2 +0.5
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.9 N.D. +0.2 +0.8 +0.4
nitrogen source DL-2-Aminobutyric (N) -0.2 N.D. +0.1 +3.8 -0.1
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