Fitness for 5 genes in Agrobacterium fabrum C58

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	Atu1474	Atu1475	Atu1476	Atu1477	Atu1478
in planta	Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	+0.2	-2.1	-0.4	+0.1	-0.1
in planta	Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	-0.4	-1.5	+0.1	-0.3	+0.2
in planta	Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=1days	-0.0	-1.5	+0.0	-0.2	-0.0
phage	AgroPhage_E10	+0.5	-1.5	+0.1	-0.0	-0.6
stress	Erythromycin 12.5 ug/mL	-1.0	+0.4	+0.0	+0.0	-0.9
in planta	Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	-0.4	-0.8	-0.2	-0.2	+0.3
in planta	Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	+0.3	-1.6	+0.3	-0.1	+0.1
in planta	Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	-0.5	-0.9	+0.4	-0.1	+0.1
in planta	Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=1days	+0.1	-1.2	+0.2	-0.2	+0.1
in planta	Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	-1.0	-0.3	-0.0	-0.2	+0.6
	Atjh15	-0.7	-0.4	+0.2	-0.3	+0.4
in planta	Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days	-0.9	-0.2	+0.3	-0.1	+0.2
carbon source	Rhamnogalacturonan - from potato (C)	-0.2	-0.9	+0.4	-0.1	+0.1
in planta	Plant=Sorghum_X54_243; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	+0.3	-1.0	+0.1	+0.2	-0.3
nophagecontrol	No phage control	+0.4	-1.0	-0.1	+0.2	-0.2
in planta	Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	-1.3	+0.7	-0.3	-0.1	+0.5
in planta	Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	+0.1	-1.0	+0.2	+0.4	+0.0
no phage	P5L5	+0.4	-0.8	+0.4	-0.1	+0.2
in planta	Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	+0.1	+0.7	-0.3	-0.5	-0.0
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-0.4	-0.5	+0.2	+0.4	+0.3
in planta	Plant=Lettuce; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days	-0.6	+0.8	+0.3	-0.2	+0.2
in planta	Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	+0.3	-0.7	+0.3	+0.6	+0.2
in planta	Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days	-0.2	+1.0	+0.2	+0.0	-0.3
in planta	Plant=Lettuce; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days	-0.2	+0.5	+0.4	+0.3	+0.3
in planta	Plant=Lettuce; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days	-0.0	+1.0	+0.3	-0.2	+0.3
in planta	Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	+0.2	+0.7	-0.1	+0.5	+0.3
in planta	Plant=Sorghum_Btx_642; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	+0.5	+0.5	+0.4	-0.1	+0.3
in planta	Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	+0.3	+0.8	+0.4	+0.4	+0.6
carbon source	D-Sorbitol (C)	+0.5	+2.1	-0.1	-0.0	+0.1
carbon source	D-Sorbitol (C)	-0.1	+2.9	+0.1	+0.1	+0.2