Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu1433 and Atu1434 are separated by 60 nucleotidesAtu1434 and Atu1435 are separated by 97 nucleotidesAtu1435 and Atu1436 are separated by 103 nucleotidesAtu1436 and Atu1437 are separated by 197 nucleotides Atu1433: Atu1433 - arylesterase, at 1,427,802 to 1,428,446 Atu1433 Atu1434: Atu1434 - dihydrolipoamide dehydrogenase, at 1,428,507 to 1,429,952 Atu1434 Atu1435: Atu1435 - hypothetical protein, at 1,430,050 to 1,430,298 Atu1435 Atu1436: Atu1436 - lipoic Acid Synthetase, at 1,430,402 to 1,431,373 Atu1436 Atu1437: Atu1437 - hypothetical protein, at 1,431,571 to 1,432,503 Atu1437
Group Condition Atu1433 Atu1434 Atu1435 Atu1436 Atu1437
carbon source Mannobiose (C) N.D. N.D. -0.5 N.D. -2.6
in planta Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. N.D. -2.2 N.D. -0.2
carbon source Asolectin from soybean (C) N.D. N.D. +0.4 N.D. -2.6
carbon source Asolectin from soybean (C) N.D. N.D. +0.5 N.D. -2.7
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct N.D. N.D. -1.4 N.D. -0.8
carbon source Mannobiose (C) N.D. N.D. -0.2 N.D. -1.8
phage AgroPhage_E04 N.D. N.D. -0.9 N.D. -0.7
in planta Plant=Arabidopsis_efr; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days N.D. N.D. -0.9 N.D. -0.3
phage Phage 100.2 + bactiera N.D. N.D. -1.0 N.D. -0.1
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct N.D. N.D. -0.6 N.D. -0.5
stress R2A with Vancomycin 0.009 mM N.D. N.D. -0.8 N.D. -0.3
stress R2A with Chloride 800 mM N.D. N.D. -0.9 N.D. -0.1
lb_tobacco_leaf LB_Tobacco_Leaf N.D. N.D. -0.8 N.D. -0.2
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Cocuture=C58C1OD2.0 N.D. N.D. -0.9 N.D. +0.1
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct N.D. N.D. -0.8 N.D. +0.3
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct N.D. N.D. +0.5 N.D. -0.8
in planta Plant=Lettuce; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days N.D. N.D. -0.5 N.D. +0.7
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. N.D. +0.8 N.D. -0.7
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days N.D. N.D. +0.8 N.D. -0.4
lb_tomato_leaf LB_Tomato_Leaf N.D. N.D. +0.9 N.D. -0.1
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct N.D. N.D. +1.1 N.D. -0.2
phage AgroPhage_C04 N.D. N.D. +1.1 N.D. -0.1
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant N.D. N.D. +1.2 N.D. -0.2
r2a_control R2A control N.D. N.D. +0.9 N.D. +0.1
no phage P2L5 N.D. N.D. +0.7 N.D. +0.3
in planta Plant=Sorghum_Btx_642; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. N.D. +1.0 N.D. +0.1
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. N.D. +1.0 N.D. +0.1
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct N.D. N.D. +1.0 N.D. +0.2
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct N.D. N.D. +1.0 N.D. +0.5
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct N.D. N.D. +1.4 N.D. +0.2
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