Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu1426 and Atu1427 are separated by 12 nucleotidesAtu1427 and Atu1428 are separated by 121 nucleotidesAtu1428 and Atu1429 are separated by 276 nucleotidesAtu1429 and Atu1430 are separated by 17 nucleotides Atu1426: Atu1426 - enolase, at 1,421,590 to 1,422,864 Atu1426 Atu1427: Atu1427 - hypothetical protein, at 1,422,877 to 1,423,056 Atu1427 Atu1428: Atu1428 - hypothetical protein, at 1,423,178 to 1,423,495 Atu1428 Atu1429: Atu1429 - pyruvate dehydrogenase alpha subunit, at 1,423,772 to 1,424,692 Atu1429 Atu1430: Atu1430 - pyruvate dehydrogenase beta subunit, at 1,424,710 to 1,426,131 Atu1430
Group Condition Atu1426 Atu1427 Atu1428 Atu1429 Atu1430
phage AgroPhage_C04 N.D. -1.1 N.D. N.D. N.D.
phage AgroPhage_H04 N.D. -1.0 N.D. N.D. N.D.
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct N.D. -0.8 N.D. N.D. N.D.
Atjh14 N.D. -0.8 N.D. N.D. N.D.
carbon source Asolectin from soybean (C) N.D. -0.7 N.D. N.D. N.D.
lb_sorghum nk 300 LB_Sorghum NK 300 N.D. -0.6 N.D. N.D. N.D.
nitrogen source L-Glutamine (N) N.D. -0.6 N.D. N.D. N.D.
phage AgroPhage_C10 N.D. -0.6 N.D. N.D. N.D.
stress R2A with Fusidic 0.002 mM N.D. -0.6 N.D. N.D. N.D.
lb_cucumber_cotlyden LB_cucumber_cotlyden N.D. -0.6 N.D. N.D. N.D.
carbon source D-(+)-melezitose (C) N.D. -0.6 N.D. N.D. N.D.
carbon source D-Glucose (C) N.D. -0.6 N.D. N.D. N.D.
nitrogen source L-Leucine (N) N.D. -0.6 N.D. N.D. N.D.
stress R2A with Chlorite 0.2 mM N.D. +0.6 N.D. N.D. N.D.
r2a_control R2A control N.D. +0.6 N.D. N.D. N.D.
No phage control N.D. +0.6 N.D. N.D. N.D.
stress R2A with Novobiocin 0.002 mM N.D. +0.6 N.D. N.D. N.D.
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct N.D. +0.6 N.D. N.D. N.D.
stress Acetosyringone 1.25 mM N.D. +0.6 N.D. N.D. N.D.
in planta Plant=Lettuce; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days N.D. +0.6 N.D. N.D. N.D.
in planta Plant=Arabidopsis_efr; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days N.D. +0.6 N.D. N.D. N.D.
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct N.D. +0.6 N.D. N.D. N.D.
nitrogen source DL-2-Aminobutyric (N) N.D. +0.7 N.D. N.D. N.D.
Atjh15 N.D. +0.7 N.D. N.D. N.D.
stress R2A with sodium iodate 30 mM N.D. +0.7 N.D. N.D. N.D.
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI N.D. +0.7 N.D. N.D. N.D.
stress R2A with Kanamycin sulfate 0.02 mM N.D. +0.7 N.D. N.D. N.D.
in planta Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days N.D. +0.8 N.D. N.D. N.D.
in planta Plant=Arabidopsis_efr; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days N.D. +0.8 N.D. N.D. N.D.
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days N.D. +0.9 N.D. N.D. N.D.
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