Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu1419 and Atu1420 are separated by 155 nucleotidesAtu1420 and Atu1421 are separated by 198 nucleotidesAtu1421 and Atu1422 overlap by 11 nucleotidesAtu1422 and Atu1423 are separated by 307 nucleotides Atu1419: Atu1419 - transcriptional regulator, GntR family, at 1,415,598 to 1,416,332 Atu1419 Atu1420: Atu1420 - glycine cleavage system T protein, aminomethyltransferase, at 1,416,488 to 1,417,903 Atu1420 Atu1421: Atu1421 - hypothetical protein, at 1,418,102 to 1,418,977 Atu1421 Atu1422: Atu1422 - transcriptional regulator, MarR family, at 1,418,967 to 1,419,422 Atu1422 Atu1423: Atu1423 - hypothetical protein, at 1,419,730 to 1,420,608 Atu1423
Group Condition Atu1419 Atu1420 Atu1421 Atu1422 Atu1423
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -3.9 -0.0 +0.1 -6.9 +0.2
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -3.8 +0.2 +0.2 -6.3 -0.2
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -3.3 +0.0 +0.1 -5.8 -0.1
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -3.2 -0.0 -0.0 -5.9 +0.0
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -2.9 +0.1 -0.0 -5.7 -0.1
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Cocuture=C58C1OD0.075 -3.3 +0.0 +0.3 -5.2 +0.1
carbon source p-Coumaric (C) -0.6 -0.1 -4.4 -2.8 -0.2
no phage P2L4 -3.1 +0.0 -0.2 -4.4 +0.2
carbon source p-Coumaric (C) -0.7 +0.0 -4.1 -2.9 +0.3
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Cocuture=C58C1OD0.075 -2.9 +0.2 +0.1 -4.4 -0.1
no phage P1L4 -2.5 -0.0 -0.2 -4.0 -0.0
no phage P4L4 -2.3 +0.1 +0.0 -4.6 +0.1
carbon source Phloretic Acid (C) -1.4 -0.2 -3.0 -1.7 -0.1
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Cocuture=C58C1OD0.075 -2.4 +0.0 +0.3 -3.7 -0.3
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Cocuture=C58C1OD0.075 -2.7 +0.0 +0.2 -3.8 +0.1
carbon source Phloretic Acid (C) -1.1 -0.1 -3.1 -1.6 -0.0
carbon source Ferulic Acid (C) -2.0 -1.3 -1.1 -1.0 +0.2
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Cocuture=C58C1OD2.0 -1.5 -0.1 +0.1 -4.0 +0.2
no phage P3L4 -1.6 +0.2 +0.1 -3.8 +0.1
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -1.8 +0.2 -0.1 -3.2 -0.2
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Cocuture=C58C1OD0.075 -1.5 -0.0 +0.1 -3.6 +0.1
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -1.5 -0.1 -0.7 -2.6 -0.0
carbon source Ferulic Acid (C) -1.8 -1.1 -0.8 -1.3 +0.1
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Cocuture=C58C1OD2.0 -1.7 +0.1 +0.2 -3.6 +0.1
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -1.4 +0.1 -0.1 -3.7 +0.2
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Cocuture=C58C1OD2.0 -1.4 -0.1 -0.1 -3.5 +0.2
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -1.2 -0.0 -0.5 -2.8 -0.2
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Cocuture=C58C1OD2.0 -1.6 +0.0 +0.0 -3.3 +0.2
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Cocuture=C58C1OD2.0 -1.3 +0.2 +0.3 -3.4 -0.2
no phage P4L5 -1.2 +0.2 +0.1 -3.3 -0.1
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