Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu1414 and Atu1415 are separated by 34 nucleotidesAtu1415 and Atu1416 overlap by 4 nucleotidesAtu1416 and Atu1417 are separated by 144 nucleotidesAtu1417 and Atu1418 are separated by 49 nucleotides Atu1414: Atu1414 - acyl-CoA dehydrogenase, at 1,409,176 to 1,410,738 Atu1414 Atu1415: Atu1415 - 3-hydroxyacyl-CoA dehydrogenase type II, at 1,410,773 to 1,411,546 Atu1415 Atu1416: Atu1416 - long-chain-fatty-acid-CoA-ligase, at 1,411,543 to 1,413,378 Atu1416 Atu1417: Atu1417 - enoyl-CoA hydratase, at 1,413,523 to 1,414,320 Atu1417 Atu1418: Atu1418 - methylenetetrahydrofolate reductase, at 1,414,370 to 1,415,290 Atu1418
Group Condition Atu1414 Atu1415 Atu1416 Atu1417 Atu1418
carbon source p-Coumaric (C) -0.3 -1.7 -0.8 -5.9 -0.1
carbon source Phloretic Acid (C) -2.8 -3.0 +3.4 -5.9 +0.1
carbon source p-Coumaric (C) +0.2 -2.0 -0.7 -5.4 -0.0
carbon source Ferulic Acid (C) -0.0 -0.8 -0.2 -5.0 -1.7
carbon source Phloretic Acid (C) -2.4 -2.4 +3.7 -5.8 -0.1
carbon source Ferulic Acid (C) -0.1 -0.5 -0.0 -4.2 -1.2
in planta Plant=Cucumber; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.0 -0.2 -0.1 -5.0 +0.2
in planta Plant=Cucumber; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.1 -0.2 -0.0 -4.4 -0.4
in planta Plant=Cucumber; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.0 -0.3 -0.1 -4.8 +0.1
in planta Plant=Cucumber; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.2 -0.1 +0.1 -4.2 -0.4
no phage P2L4 +0.1 +0.1 +0.2 -4.9 -0.2
in planta Plant=Cucumber; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.0 -0.3 +0.1 -4.6 +0.0
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.0 +0.3 +0.1 -5.1 +0.1
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.0 -0.4 -0.4 -3.1 -0.4
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days +0.1 -0.2 -0.1 -3.7 -0.4
in planta Plant=Cucumber; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.1 -0.3 -0.1 -3.9 +0.2
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.0 +0.2 +0.3 -4.6 -0.1
no phage P1L4 +0.3 +0.1 +0.2 -4.3 -0.3
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Cocuture=C58C1OD0.075 +0.3 +0.1 +0.3 -4.9 +0.2
no phage P4L4 +0.1 +0.2 +0.3 -4.6 -0.1
in planta Plant=Cucumber; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.2 -0.1 -0.0 -3.8 +0.2
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.3 +0.1 +0.3 -4.6 +0.0
no phage P3L4 +0.2 +0.3 +0.2 -4.7 +0.3
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.0 +0.2 +0.2 -3.9 -0.1
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.3 +0.4 +0.4 -4.3 +0.0
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Cocuture=C58C1OD0.075 +0.1 +0.5 +0.2 -3.8 -0.1
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.2 +0.5 +0.4 -4.0 -0.1
in planta Plant=Sorghum_NK_300; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.2 -0.3 +0.0 -3.3 +0.6
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.2 +0.4 +0.2 -3.4 +0.2
in planta Plant=Sorghum_X54_243; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.0 +0.2 +0.2 -3.3 +0.7
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