Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu1396 and Atu1397 overlap by 20 nucleotidesAtu1397 and Atu1398 overlap by 1 nucleotidesAtu1398 and Atu1399 are separated by 68 nucleotidesAtu1399 and Atu1400 are separated by 65 nucleotides Atu1396: Atu1396 - ABC transporter, nucleotide binding/ATPase protein, at 1,391,275 to 1,392,006 Atu1396 Atu1397: Atu1397 - ABC transporter, membrane spanning protein (amino acid), at 1,391,987 to 1,392,640 Atu1397 Atu1398: Atu1398 - ABC transporter, membrane spanning protein (amino acid), at 1,392,640 to 1,393,344 Atu1398 Atu1399: Atu1399 - ABC transporter, substrate binding protein (amino acid), at 1,393,413 to 1,394,216 Atu1399 Atu1400: Atu1400 - phosphoglycerate dehydrogenase, at 1,394,282 to 1,395,268 Atu1400
Group Condition Atu1396 Atu1397 Atu1398 Atu1399 Atu1400
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.1 -0.1 -1.1 -0.9 -0.2
in planta Plant=Sorghum_SS_20; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.0 -0.0 -1.0 -0.4 -0.5
in planta Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.4 -0.7 -0.5 +0.3 -0.1
phage AgroPhage_E04 +0.2 -0.7 -0.5 +0.2 -0.4
in planta Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.3 -0.4 +0.2 -0.9 +0.2
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.2 +0.0 -1.1 +0.1 +0.1
phage AgroPhage_H03 +0.1 -0.2 -0.8 -0.1 +0.2
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.4 -0.1 -0.8 -0.3 +0.1
phage AgroPhage_C10 -0.6 -0.5 -0.5 +0.8 +0.2
phage AgroPhage_C04 -0.6 -0.1 +0.5 -0.1 -0.3
phage AgroPhage_F03 +0.1 +0.1 +0.4 -0.7 -0.2
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.2 +0.3 -0.5 -0.3 +0.1
in planta Plant=Sorghum_NK_300; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.2 -0.1 -0.8 +0.4 +0.3
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.1 +0.8 -0.1 -0.7 +0.3
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=1days +0.3 +0.2 +0.4 -0.8 +0.3
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.6 +0.7 -0.5 -0.4 +0.2
in planta Plant=Sorghum_X54_243; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.2 +0.1 -0.5 +1.0 -0.0
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.4 +0.3 +0.6 +0.0 +0.3
phage AgroPhage_B07 +0.7 +0.2 -0.3 -0.2 +0.3
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.1 +0.3 -0.4 +1.0 -0.0
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.0 +0.2 +1.1 +0.3 -0.2
carbon source D-Saccharic potassium salt (C) -0.1 +0.4 +0.2 +0.8 +0.1
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.0 -0.1 +0.2 +1.2 +0.1
in planta Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.2 -0.1 +0.5 +1.0 -0.0
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.3 +0.5 +0.8 +0.4 +0.2
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.0 +0.8 +0.6 +0.2 +0.0
nitrogen source DL-2-Aminobutyric (N) +0.2 +0.4 +1.0 -0.3 +0.2
in planta Plant=Lettuce; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days -0.1 +0.6 +0.3 +0.6 +0.3
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.2 +0.8 +0.3 +0.9 +0.1
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.2 +0.8 +0.5 +0.5 +0.3
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