Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu1393 and Atu1394 are separated by 19 nucleotidesAtu1394 and Atu1395 are separated by 260 nucleotidesAtu1395 and Atu1396 are separated by 382 nucleotidesAtu1396 and Atu1397 overlap by 20 nucleotides Atu1393: Atu1393 - hypothetical protein, at 1,386,783 to 1,389,212 Atu1393 Atu1394: Atu1394 - glutathione S-transferase, at 1,389,232 to 1,389,909 Atu1394 Atu1395: Atu1395 - LexA repressor, at 1,390,170 to 1,390,892 Atu1395 Atu1396: Atu1396 - ABC transporter, nucleotide binding/ATPase protein, at 1,391,275 to 1,392,006 Atu1396 Atu1397: Atu1397 - ABC transporter, membrane spanning protein (amino acid), at 1,391,987 to 1,392,640 Atu1397
Group Condition Atu1393 Atu1394 Atu1395 Atu1396 Atu1397
in planta Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.0 -0.4 N.D. -0.4 -0.7
in planta Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.0 -0.5 N.D. -0.3 -0.4
phage AgroPhage_C10 -0.2 +0.1 N.D. -0.6 -0.5
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.0 -0.5 N.D. +0.0 -0.4
in planta Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.0 -0.7 N.D. +0.1 -0.3
in planta Plant=Sorghum_Btx_642; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.4 -0.4 N.D. -0.2 +0.1
in planta Plant=Lettuce; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.1 -0.6 N.D. -0.3 +0.0
phage AgroPhage_E04 -0.3 -0.0 N.D. +0.2 -0.6
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.1 -0.5 N.D. -0.2 +0.2
phage AgroPhage_D04 +0.2 -0.7 N.D. +0.3 -0.2
stress R2A with Tetracycline 0.002 mM -0.2 -0.4 N.D. +0.2 +0.2
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.1 -0.5 N.D. +0.4 -0.1
lb_tobacco_leaf LB_Tobacco_Leaf +0.2 -0.4 N.D. +0.3 -0.0
phage phage 100.3 -0.1 -0.4 N.D. +0.1 +0.5
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.5 -0.5 N.D. +0.6 +0.7
phage AgroPhage_H04 +0.1 -0.4 N.D. +0.5 +0.1
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.1 -0.3 N.D. +0.2 +0.3
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.5 -0.2 N.D. +0.3 -0.2
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=1days +0.2 -0.3 N.D. +0.3 +0.3
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days +0.3 -0.4 N.D. +0.2 +0.4
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.1 -0.2 N.D. -0.0 +0.8
phage AgroPhage_F10 +0.2 -0.2 N.D. +0.4 +0.3
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days +0.2 -0.3 N.D. +0.2 +0.5
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.2 -0.1 N.D. -0.2 +0.9
phage AgroPhage_B07 +0.0 -0.2 N.D. +0.7 +0.2
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.2 +0.1 N.D. -0.1 +0.8
nitrogen source DL-2-Aminobutyric (N) +0.3 +0.1 N.D. +0.2 +0.4
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.1 +0.0 N.D. +0.2 +0.8
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.1 +0.3 N.D. +0.5 +0.3
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.2 -0.1 N.D. +0.3 +0.7
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