Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu8156 and Atu1366 overlap by 1 nucleotidesAtu1366 and Atu1367 are separated by 12 nucleotidesAtu1367 and Atu1368 are separated by 110 nucleotidesAtu1368 and Atu1369 are separated by 126 nucleotides Atu8156: Atu8156 - hypothetical protein, at 1,360,932 to 1,361,690 Atu8156 Atu1366: Atu1366 - hypothetical protein, at 1,361,690 to 1,362,031 Atu1366 Atu1367: Atu1367 - transcriptional regulator, LysR family, at 1,362,044 to 1,362,910 Atu1367 Atu1368: Atu1368 - hypothetical protein, at 1,363,021 to 1,363,872 Atu1368 Atu1369: Atu1369 - HIT family protein, at 1,363,999 to 1,364,427 Atu1369
Group Condition Atu8156 Atu1366 Atu1367 Atu1368 Atu1369
stress Chloramphenicol 12.5 ug/mL -1.2 +0.2 +0.1 -0.4 -2.1
stress Erythromycin 12.5 ug/mL -0.2 -0.2 +0.0 -0.1 -2.1
in planta Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.5 -1.2 -0.0 -0.2 -1.2
stress Erythromycin 12.5 ug/mL +0.2 +0.1 +0.1 -0.2 -2.1
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.5 -1.6 -0.1 -0.3 -0.2
phage AgroPhage_C10 +0.8 +0.2 -0.3 -0.1 -1.7
stress R2A with Vancomycin 0.009 mM +0.3 -0.5 +0.4 -0.3 -0.8
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.3 -0.1 +0.5 +0.4 -0.9
stress Chloramphenicol 12.5 ug/mL +0.6 +0.1 +0.3 +0.2 -1.5
in planta Plant=Sorghum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.9 +0.3 -0.2 -0.1 +0.8
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.1 -0.5 -0.1 -0.5 +1.1
phage AgroPhage_F10 +0.6 +0.8 -0.3 +0.1 -1.0
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.3 +0.8 +0.4 -0.2 -0.4
phage AgroPhage_A07 +0.7 +0.5 -0.3 -0.1 -0.4
in planta Plant=Sorghum_SS_20; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.8 -0.6 +0.3 +0.2 -0.4
phage AgroPhage_E10 +0.2 +0.7 -0.1 -0.7 +0.4
in planta Plant=Lettuce; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.7 +0.6 +0.1 +0.1 +0.5
in planta Bethi_Library_OD1.0 +0.8 -0.4 -0.2 +0.3 +0.3
phage AgroPhage_F03 +0.9 +0.4 -0.5 -0.1 +0.2
in planta Plant=Sorghum_NK_300; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.6 +0.3 +0.2 -0.6 +0.6
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +1.1 -0.2 +0.1 -0.2 +0.4
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.9 +0.6 +0.2 -0.1 -0.2
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.5 -0.2 +0.2 -0.2 +1.0
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.0 -0.0 +0.1 -0.4 +1.8
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.8 +0.7 -0.2 -0.1 +0.8
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.6 +0.9 +0.2 -0.1 +0.3
nitrogen source DL-2-Aminobutyric (N) +0.3 +0.3 +0.8 +0.5 +0.3
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.5 +0.9 -0.2 -0.1 +1.2
in planta Plant=Sorghum_Btx_642; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.8 +0.8 +0.0 -0.1 +0.8
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +2.9 -0.7 -0.4 -0.0 +0.6
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