Fitness for 5 genes in Agrobacterium fabrum C58

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 1003 experiments or choose conditions or try the comparative fitness browser

500 ntAtu1353 and Atu1354 are separated by 19 nucleotidesAtu1354 and Atu1355 are separated by 14 nucleotidesAtu1355 and Atu1356 are separated by 129 nucleotidesAtu1356 and Atu1357 overlap by 4 nucleotides Atu1353: Atu1353 - dihydroneopterin aldolase, at 1,347,605 to 1,347,970 Atu1353 Atu1354: Atu1354 - 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase, at 1,347,990 to 1,348,490 Atu1354 Atu1355: Atu1355 - hypothetical protein, at 1,348,505 to 1,349,065 Atu1355 Atu1356: Atu1356 - hypothetical protein, at 1,349,195 to 1,350,274 Atu1356 Atu1357: Atu1357 - hypothetical protein, at 1,350,271 to 1,351,749 Atu1357
Group Condition Atu1353 Atu1354 Atu1355 Atu1356 Atu1357
in planta Plant=Sorghum_SS_20; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. -2.8 -0.7 -0.9 -1.0
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. -2.9 -0.9 -0.2 -1.0
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. -2.9 -0.5 -0.6 -0.9
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. -2.5 -0.6 -0.8 -1.0
in planta Plant=Sorghum_SS_20; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. -2.7 -0.7 -0.9 -0.6
in planta Plant=Sorghum_NK_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. -2.9 -0.6 -0.6 -0.8
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. -2.9 -0.4 -0.7 -0.9
in planta Plant=Sorghum_Btx_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. -2.8 -0.3 -0.8 -0.8
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct N.D. -2.6 -0.3 -0.6 -1.0
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct N.D. -2.7 -0.2 -1.1 -0.5
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct N.D. -2.8 -0.3 -0.5 -0.9
in planta Plant=Sorghum_NK_300; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. -3.0 -0.0 -0.6 -0.6
in planta Plant=Sorghum_NK_300; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. -2.9 -0.1 -0.9 -0.4
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. -2.1 -0.5 -0.7 -0.8
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct N.D. -2.6 +0.2 -0.8 -0.9
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. -2.8 -0.2 -0.5 -0.5
benthi_leaf_lb Benthi_leaf_LB N.D. -1.4 -0.3 -1.3 -1.0
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct N.D. -2.8 +0.2 -0.7 -0.7
in planta Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days N.D. -2.8 -0.6 -0.2 -0.3
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. -2.1 -0.4 -0.7 -0.8
in planta Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. -2.2 -0.4 -0.5 -0.7
stress Chloramphenicol 12.5 ug/mL N.D. -0.6 -0.2 -2.1 -1.0
in planta Plant=Sorghum_NK_300; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. -1.4 -0.7 -0.9 -0.9
stress Chloramphenicol 6.25 ug/mL N.D. -1.1 +0.2 -1.3 -1.4
nitrogen source L-Threonine (N) N.D. -3.7 +0.0 +0.2 -0.0
stress R2A with Vancomycin 0.009 mM N.D. -0.8 -4.0 +0.7 +0.8
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct N.D. -2.8 +0.4 -0.2 -0.6
stress Erythromycin 12.5 ug/mL N.D. +1.2 -1.3 -1.3 -1.2
nophagecontrol No phage control N.D. -3.2 +0.4 +0.2 +0.1
stress R2A with Vancomycin 0.009 mM N.D. +0.1 -3.2 +0.9 +1.3
remove
Atu1353
plot		 remove
Atu1354
plot		 remove
Atu1355		 remove
Atu1356
plot		 remove
Atu1357
plot