Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu1342 and Atu1343 are separated by 74 nucleotidesAtu1343 and Atu1344 are separated by 27 nucleotidesAtu1344 and Atu1345 are separated by 19 nucleotidesAtu1345 and Atu1346 are separated by 304 nucleotides Atu1342: Atu1342 - peptide chain release factor 2, at 1,331,605 to 1,332,633 Atu1342 Atu1343: Atu1343 - hypothetical protein, at 1,332,708 to 1,333,178 Atu1343 Atu1344: Atu1344 - hypothetical protein, at 1,333,206 to 1,333,706 Atu1344 Atu1345: Atu1345 - hypothetical protein, at 1,333,726 to 1,334,499 Atu1345 Atu1346: Atu1346 - phenazine antibiotic biosynthesis related protein, at 1,334,804 to 1,335,721 Atu1346
Group Condition Atu1342 Atu1343 Atu1344 Atu1345 Atu1346
nitrogen source DL-2-Aminobutyric (N) N.D. -0.7 -2.7 N.D. -0.7
phage AgroPhage_C04 N.D. +0.1 -3.7 N.D. -0.5
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. -1.1 -1.1 N.D. -0.4
phage AgroPhage_D10 N.D. +0.3 -2.6 N.D. -0.2
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct N.D. -0.3 -2.1 N.D. +0.0
in planta Plant=Sorghum_Btx_642; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. -0.2 -1.7 N.D. -0.3
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct N.D. +0.3 -2.9 N.D. +0.5
in planta Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days N.D. -0.6 -1.4 N.D. +0.2
stress R2A with Tetracycline 0.002 mM N.D. -0.0 -1.5 N.D. -0.2
stress R2A with Spectinomycin 0.002 mM N.D. +0.1 -1.2 N.D. -0.4
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. -0.3 -1.4 N.D. +0.4
stress R2A with Nickel (II) chloride 0.05 mM N.D. +0.1 -1.3 N.D. -0.1
phage AgroPhage_E10 N.D. +0.4 -1.6 N.D. -0.1
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. +0.1 -1.8 N.D. +0.5
phage AgroPhage_D04 N.D. -0.3 -1.1 N.D. +0.2
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct N.D. -0.2 -1.4 N.D. +0.6
agar plate interaction control Parafilmed volatile agar plate with no fungus N.D. +0.7 -1.2 N.D. -0.0
in planta Plant=Sorghum_X54_243; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. +0.3 +0.4 N.D. -0.9
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct N.D. +0.2 -0.6 N.D. +0.8
in planta Plant=Sorghum_NK_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. +0.8 -0.7 N.D. +0.4
stress Chloramphenicol 12.5 ug/mL N.D. -0.5 +0.7 N.D. +0.4
phage phage 100.3 N.D. +0.2 +0.9 N.D. -0.4
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct N.D. +1.6 -0.7 N.D. -0.1
in planta Plant=Sorghum_Btx_642; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. -0.5 +0.6 N.D. +0.8
phage AgroPhage_E04 N.D. +0.3 +1.0 N.D. -0.2
nophagecontrol No phage control N.D. +0.3 +1.1 N.D. -0.2
in planta Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. -0.4 +0.9 N.D. +0.9
phage AgroPhage_B07 N.D. +0.6 +0.7 N.D. +0.2
phage phage 100.3 N.D. +0.3 +1.1 N.D. +0.3
in planta Plant=Sorghum_Btx_642; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. +0.1 +1.7 N.D. +0.3
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