Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu1332 and Atu1333 are separated by 125 nucleotidesAtu1333 and Atu1334 are separated by 167 nucleotidesAtu1334 and Atu1335 are separated by 27 nucleotidesAtu1335 and Atu1336 are separated by 74 nucleotides Atu1332: Atu1332 - 3-dehydroquinate dehydratase, at 1,318,720 to 1,319,157 Atu1332 Atu1333: Atu1333 - outer membrane protein, at 1,319,283 to 1,320,050 Atu1333 Atu1334: Atu1334 - aspartate transaminase, at 1,320,218 to 1,321,381 Atu1334 Atu1335: Atu1335 - transcriptional regulator, ArsR family, at 1,321,409 to 1,322,092 Atu1335 Atu1336: Atu1336 - hypothetical protein, at 1,322,167 to 1,322,493 Atu1336
Group Condition Atu1332 Atu1333 Atu1334 Atu1335 Atu1336
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. -2.3 -0.6 +0.1 -0.3
in planta Plant=Sorghum_Btx_642; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. -2.0 -0.4 -0.2 -0.2
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct N.D. -0.9 +0.4 -0.3 -1.9
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Cocuture=C58C1OD0.075 N.D. -2.5 +0.1 -0.2 +0.2
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Cocuture=C58C1OD0.075 N.D. -1.8 -0.4 +0.1 -0.1
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. -1.5 -0.4 -0.1 -0.1
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days N.D. -1.3 -0.6 +0.1 -0.2
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. -1.1 -0.5 +0.2 -0.7
stress R2A with Tetracycline 0.002 mM N.D. -1.2 -0.4 -0.2 -0.2
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Cocuture=C58C1OD0.075 N.D. -1.9 -0.2 +0.0 +0.0
in planta Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days N.D. -1.1 -0.4 -0.1 -0.3
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Cocuture=C58C1OD2.0 N.D. -1.3 -0.2 +0.2 -0.4
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Cocuture=C58C1OD2.0 N.D. -1.0 +0.1 -0.2 -0.7
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days N.D. -0.8 -0.2 -0.2 -0.6
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Cocuture=C58C1OD0.075 N.D. -1.3 +0.2 +0.0 -0.5
stress R2A with Calcium Chloride Dihydrate 87.5 mM N.D. -1.6 +0.0 -0.2 +0.2
in planta Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days N.D. -1.2 +0.4 -0.1 -0.5
in planta Plant=Sorghum_X54_243; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. -1.1 -0.1 -0.3 +0.2
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Cocuture=C58C1OD2.0 N.D. -0.9 -0.1 +0.2 -0.4
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Cocuture=C58C1OD2.0 N.D. -1.3 -0.3 +0.1 +0.2
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct N.D. +0.4 +0.0 +0.3 -1.8
stress Nerol 1.25 mM N.D. -1.2 +0.1 -0.2 +0.4
nitrogen source DL-2-Aminobutyric (N) N.D. +1.1 -1.2 -0.3 -0.3
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct N.D. +0.5 -0.4 +0.3 -1.0
in planta Plant=Sorghum_Btx_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. -0.6 +0.5 +0.3 -0.6
phage AgroPhage_B07 N.D. +0.7 -0.1 +0.1 -0.9
phage AgroPhage_D07 N.D. +0.7 -0.1 +0.3 -0.6
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. -0.8 +0.6 -0.3 +1.0
in planta Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. -0.2 +0.2 -0.3 +1.2
phage AgroPhage_A01 N.D. +1.2 +0.3 -0.1 +0.2
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