Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu1331 and Atu1332 are separated by 25 nucleotidesAtu1332 and Atu1333 are separated by 125 nucleotidesAtu1333 and Atu1334 are separated by 167 nucleotidesAtu1334 and Atu1335 are separated by 27 nucleotides Atu1331: Atu1331 - acetyl-CoA carboxylase, biotin carboxyl carrier protein, at 1,318,206 to 1,318,694 Atu1331 Atu1332: Atu1332 - 3-dehydroquinate dehydratase, at 1,318,720 to 1,319,157 Atu1332 Atu1333: Atu1333 - outer membrane protein, at 1,319,283 to 1,320,050 Atu1333 Atu1334: Atu1334 - aspartate transaminase, at 1,320,218 to 1,321,381 Atu1334 Atu1335: Atu1335 - transcriptional regulator, ArsR family, at 1,321,409 to 1,322,092 Atu1335
Group Condition Atu1331 Atu1332 Atu1333 Atu1334 Atu1335
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. N.D. -2.3 -0.6 +0.1
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Cocuture=C58C1OD0.075 N.D. N.D. -2.5 +0.1 -0.2
in planta Plant=Sorghum_Btx_642; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. N.D. -2.0 -0.4 -0.2
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Cocuture=C58C1OD0.075 N.D. N.D. -1.8 -0.4 +0.1
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Cocuture=C58C1OD0.075 N.D. N.D. -1.9 -0.2 +0.0
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. N.D. -1.5 -0.4 -0.1
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days N.D. N.D. -1.3 -0.6 +0.1
stress R2A with Tetracycline 0.002 mM N.D. N.D. -1.2 -0.4 -0.2
stress R2A with Calcium Chloride Dihydrate 87.5 mM N.D. N.D. -1.6 +0.0 -0.2
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. N.D. -1.3 -0.3 -0.0
stress Erythromycin 12.5 ug/mL N.D. N.D. -1.6 -0.2 +0.1
in planta Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days N.D. N.D. -1.1 -0.4 -0.1
stress Acetosyringone 1.25 mM N.D. N.D. -1.5 -0.0 -0.1
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct N.D. N.D. -1.3 -0.2 +0.0
stress Erythromycin 12.5 ug/mL N.D. N.D. -1.7 +0.0 +0.3
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Cocuture=C58C1OD2.0 N.D. N.D. -1.3 -0.2 +0.2
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Cocuture=C58C1OD2.0 N.D. N.D. -1.3 -0.3 +0.1
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. N.D. -1.1 -0.5 +0.2
stress methyl jasmonate 5 mM N.D. N.D. -1.4 +0.1 -0.0
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Cocuture=C58C1OD0.075 N.D. N.D. -1.3 +0.2 +0.0
stress Timentin 6.25 ug/mL N.D. N.D. -1.4 +0.1 +0.2
agar plate interaction control Parafilmed volatile agar plate with no fungus N.D. N.D. -0.9 -0.4 +0.3
in planta Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days N.D. N.D. -1.2 +0.4 -0.1
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct N.D. N.D. -0.9 +0.5 -0.3
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. N.D. -0.8 +0.6 -0.3
nitrogen source DL-2-Aminobutyric (N) N.D. N.D. +1.1 -1.2 -0.3
stress R2A with Ceftazidime 4 mM N.D. N.D. +1.2 -0.1 -0.3
phage AgroPhage_A01 N.D. N.D. +1.2 +0.3 -0.1
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. N.D. +0.9 +0.4 +0.3
stress Streptomycin 200 ug/mL N.D. N.D. +1.3 +0.1 +0.2
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