Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu1318 and Atu1319 are separated by 56 nucleotidesAtu1319 and Atu1320 are separated by 20 nucleotidesAtu1320 and Atu1321 are separated by 66 nucleotidesAtu1321 and Atu1322 are separated by 275 nucleotides Atu1318: Atu1318 - glutamyl-tRNA-Gln-amidotransferase chain C, at 1,308,566 to 1,308,853 Atu1318 Atu1319: Atu1319 - glutamyl-tRNA amidotransferase subunit A, at 1,308,910 to 1,310,391 Atu1319 Atu1320: Atu1320 - acetyltransferase, at 1,310,412 to 1,310,879 Atu1320 Atu1321: Atu1321 - hypothetical protein, at 1,310,946 to 1,311,203 Atu1321 Atu1322: Atu1322 - acetyltransferase, at 1,311,479 to 1,311,988 Atu1322
Group Condition Atu1318 Atu1319 Atu1320 Atu1321 Atu1322
phage AgroPhage_E04 N.D. N.D. +0.4 -1.0 -0.1
stress R2A with tungstate 375 mM N.D. N.D. -0.6 +0.6 -0.5
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. N.D. +0.1 -0.8 +0.3
in planta Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. N.D. -0.6 +0.8 -0.4
phage AgroPhage_C04 N.D. N.D. -0.1 +0.5 -0.6
in planta Bethi_Library_OD0.05 N.D. N.D. +0.3 -0.8 +0.3
in planta Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days N.D. N.D. -0.3 +0.7 -0.5
stress Erythromycin 6.25 ug/mL N.D. N.D. +0.4 -0.6 +0.2
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct N.D. N.D. -0.1 -0.5 +0.8
nitrogen source DL-2-Aminobutyric (N) N.D. N.D. -0.4 +0.1 +0.6
phage AgroPhage_D04 N.D. N.D. +0.7 -0.5 +0.0
in planta Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days N.D. N.D. +0.2 +0.6 -0.5
phage phage 100.2 N.D. N.D. +0.5 +0.4 -0.3
in planta Plant=Sorghum_SS_20; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. N.D. -0.1 +0.9 -0.1
in planta Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days N.D. N.D. +0.5 +0.4 -0.2
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. N.D. -0.2 +0.2 +0.8
in planta Plant=Sorghum_NK_300; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. N.D. +0.8 +0.5 -0.2
nophagecontrol No phage control N.D. N.D. +0.1 +1.0 +0.0
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct N.D. N.D. +0.8 +0.3 -0.0
in planta Plant=Lettuce; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days N.D. N.D. +0.3 +0.5 +0.3
carbon source sarcosine (C) N.D. N.D. +0.5 +0.4 +0.3
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=1days N.D. N.D. +0.6 +0.1 +0.4
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=1days N.D. N.D. +0.4 +0.3 +0.4
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=1days N.D. N.D. +0.4 +0.5 +0.4
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct N.D. N.D. +0.5 +0.5 +0.3
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct N.D. N.D. +1.1 +0.2 +0.3
in planta Plant=Lettuce; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days N.D. N.D. +0.9 +0.4 +0.3
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct N.D. N.D. +0.1 +1.1 +0.5
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct N.D. N.D. +0.9 +0.6 +0.2
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI N.D. N.D. +0.2 +1.6 -0.1
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