Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu1314 and Atu8155 are separated by 404 nucleotidesAtu8155 and Atu1316 overlap by 49 nucleotidesAtu1316 and Atu1317 are separated by 5 nucleotidesAtu1317 and Atu1318 are separated by 126 nucleotides Atu1314: Atu1314 - transcriptional regulator, TetR family, at 1,305,536 to 1,306,180 Atu1314 Atu8155: Atu8155 - hypothetical protein, at 1,306,585 to 1,306,902 Atu8155 Atu1316: Atu1316 - hypothetical protein, at 1,306,854 to 1,307,333 Atu1316 Atu1317: Atu1317 - metal dependent hydrolase, at 1,307,339 to 1,308,439 Atu1317 Atu1318: Atu1318 - glutamyl-tRNA-Gln-amidotransferase chain C, at 1,308,566 to 1,308,853 Atu1318
Group Condition Atu1314 Atu8155 Atu1316 Atu1317 Atu1318
phage AgroPhage_F10 -0.3 -1.2 N.D. -0.2 N.D.
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.4 -1.8 N.D. -0.2 N.D.
phage AgroPhage_F04 +0.1 -1.2 N.D. -0.3 N.D.
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.6 -0.2 N.D. -0.6 N.D.
in planta Plant=Sorghum_X54_243; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.6 -0.6 N.D. -0.0 N.D.
phage AgroPhage_D04 -0.0 -0.8 N.D. -0.5 N.D.
in planta Plant=Sorghum_SS_20; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.3 -0.1 N.D. -0.8 N.D.
stress R2A with Vancomycin 0.009 mM -0.6 -0.5 N.D. +0.2 N.D.
phage AgroPhage_D10 -0.5 -0.5 N.D. +0.2 N.D.
in planta Plant=Sorghum_Btx_642; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.1 -1.0 N.D. +0.2 N.D.
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.9 +0.1 N.D. +0.2 N.D.
in planta Plant=Sorghum_X54_243; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.3 -0.6 N.D. -0.2 N.D.
carbon source m-Inositol (C) -0.8 +0.4 N.D. +0.1 N.D.
in planta Plant=Sorghum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -1.0 +0.3 N.D. +0.2 N.D.
phage AgroPhage_E04 +0.1 -0.9 N.D. +0.5 N.D.
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.1 -0.8 N.D. +0.4 N.D.
in planta Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.3 +0.6 N.D. -0.3 N.D.
phage AgroPhage_H04 +0.7 -0.5 N.D. +0.3 N.D.
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +1.1 -0.5 N.D. +0.0 N.D.
carbon source 4-Hydroxybenzoic Acid (C) +0.5 -0.2 N.D. +0.5 N.D.
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.3 +0.7 N.D. +0.3 N.D.
in planta Plant=Lettuce; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.3 +0.6 N.D. +0.5 N.D.
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.9 +0.4 N.D. -0.2 N.D.
nitrogen source DL-2-Aminobutyric (N) +1.9 -0.2 N.D. -0.6 N.D.
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.8 +0.1 N.D. +0.4 N.D.
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.1 +0.7 N.D. +0.5 N.D.
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.2 +1.1 N.D. +0.1 N.D.
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +1.4 -0.3 N.D. +0.5 N.D.
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.6 +1.0 N.D. -0.0 N.D.
in planta Plant=Sorghum_Btx_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +1.0 +0.5 N.D. -0.0 N.D.
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