Fitness for 5 genes in Agrobacterium fabrum C58

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 1003 experiments or choose conditions or try the comparative fitness browser

500 ntAtu1312 and Atu8154 overlap by 4 nucleotidesAtu8154 and Atu1314 are separated by 153 nucleotidesAtu1314 and Atu8155 are separated by 404 nucleotidesAtu8155 and Atu1316 overlap by 49 nucleotides Atu1312: Atu1312 - hypothetical protein, at 1,304,715 to 1,305,011 Atu1312 Atu8154: Atu8154 - Plasmid stabilization system protein, at 1,305,008 to 1,305,382 Atu8154 Atu1314: Atu1314 - transcriptional regulator, TetR family, at 1,305,536 to 1,306,180 Atu1314 Atu8155: Atu8155 - hypothetical protein, at 1,306,585 to 1,306,902 Atu8155 Atu1316: Atu1316 - hypothetical protein, at 1,306,854 to 1,307,333 Atu1316
Group Condition Atu1312 Atu8154 Atu1314 Atu8155 Atu1316
in planta Plant=Sorghum_X54_243; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. -0.5 -0.7 -0.6 N.D.
phage AgroPhage_E10 N.D. -1.3 -0.1 -0.3 N.D.
phage AgroPhage_F10 N.D. -0.0 -0.3 -1.2 N.D.
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct N.D. -0.0 +0.4 -1.8 N.D.
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct N.D. -0.6 -0.6 -0.2 N.D.
phage AgroPhage_F04 N.D. -0.2 +0.1 -1.2 N.D.
in planta Plant=Sorghum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days N.D. -0.5 -1.0 +0.3 N.D.
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct N.D. -1.5 +1.1 -0.5 N.D.
phage AgroPhage_D10 N.D. +0.4 -0.5 -0.5 N.D.
stress Chloramphenicol 12.5 ug/mL N.D. +0.0 -0.9 +0.4 N.D.
carbon source Methyl beta-D-glucopyranoside (C) N.D. -0.9 +0.1 +0.4 N.D.
in planta Plant=Sorghum_Btx_642; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. +0.7 +0.1 -1.0 N.D.
carbon source m-Inositol (C) N.D. +0.3 -0.8 +0.4 N.D.
phage AgroPhage_D04 N.D. +0.8 -0.0 -0.8 N.D.
phage AgroPhage_H04 N.D. -0.2 +0.7 -0.5 N.D.
nophagecontrol No phage control N.D. +0.8 +0.0 -0.7 N.D.
agar plate interaction control Parafilmed volatile agar plate with no fungus N.D. -0.7 +0.9 +0.4 N.D.
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct N.D. -0.4 +1.4 -0.3 N.D.
carbon source D-Saccharic potassium salt (C) N.D. +0.7 +0.4 -0.4 N.D.
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct N.D. -0.8 +0.6 +1.0 N.D.
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI N.D. +1.2 -0.0 -0.3 N.D.
in planta Plant=Lettuce; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days N.D. +0.8 +0.4 -0.2 N.D.
nitrogen source DL-2-Aminobutyric (N) N.D. -0.6 +1.9 -0.2 N.D.
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct N.D. -0.1 +0.2 +1.1 N.D.
carbon source D-Leucrose (C) N.D. +0.9 -0.1 +0.4 N.D.
in planta Plant=Cucumber; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days N.D. +0.3 +0.5 +0.5 N.D.
in planta Plant=Sorghum_Btx_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. +0.8 +0.0 +0.5 N.D.
stress Erythromycin 12.5 ug/mL N.D. +0.4 +0.1 +0.9 N.D.
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant N.D. +1.2 +0.5 -0.1 N.D.
in planta Plant=Sorghum_Btx_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. +0.1 +1.0 +0.5 N.D.
remove
Atu1312
plot		 remove
Atu8154
plot		 remove
Atu1314		 remove
Atu8155
plot		 remove
Atu1316
plot