Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu1302 and Atu1303 are separated by 42 nucleotidesAtu1303 and Atu1304 overlap by 4 nucleotidesAtu1304 and Atu1305 are separated by 445 nucleotidesAtu1305 and Atu1306 are separated by 21 nucleotides Atu1302: Atu1302 - hypothetical protein, at 1,291,206 to 1,291,649 Atu1302 Atu1303: Atu1303 - exoribonuclease, at 1,291,692 to 1,294,046 Atu1303 Atu1304: Atu1304 - DNA topoisomerase I, at 1,294,043 to 1,296,721 Atu1304 Atu1305: Atu1305 - DNA processing chain A, at 1,297,167 to 1,298,309 Atu1305 Atu1306: Atu1306 - hypothetical protein, at 1,298,331 to 1,298,939 Atu1306
Group Condition Atu1302 Atu1303 Atu1304 Atu1305 Atu1306
stress Erythromycin 6.25 ug/mL -0.1 -5.4 N.D. +0.1 N.D.
stress Erythromycin 6.25 ug/mL +0.0 -5.3 N.D. -0.0 N.D.
stress Erythromycin 12.5 ug/mL +0.1 -4.3 N.D. +0.2 N.D.
stress Erythromycin 12.5 ug/mL -0.6 -3.5 N.D. +0.2 N.D.
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -2.9 -0.8 N.D. -0.2 N.D.
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -1.3 -0.9 N.D. -0.5 N.D.
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -2.2 -0.3 N.D. +0.3 N.D.
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -1.3 -0.5 N.D. -0.2 N.D.
stress Chloramphenicol 12.5 ug/mL -1.6 -0.5 N.D. +0.1 N.D.
stress R2A with Tetracycline 0.002 mM -0.4 -1.7 N.D. +0.0 N.D.
in planta Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -1.7 -0.2 N.D. +0.0 N.D.
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -1.0 -0.7 N.D. -0.1 N.D.
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -1.2 -0.1 N.D. -0.3 N.D.
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -1.4 -0.2 N.D. -0.1 N.D.
stress R2A with m-arsenite 0.8 mM -1.2 -0.1 N.D. -0.3 N.D.
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -1.5 +0.1 N.D. -0.0 N.D.
stress R2A with Tetracycline 0.002 mM -0.0 -1.6 N.D. +0.3 N.D.
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -1.3 -0.4 N.D. +0.4 N.D.
stress R2A with tungstate 375 mM -1.4 +0.1 N.D. +0.1 N.D.
carbon source NAG (C) +0.4 -1.6 N.D. +0.2 N.D.
carbon source NAG (C) +0.4 -1.4 N.D. +0.2 N.D.
nitrogen source NAG (N) +0.4 -1.0 N.D. +0.2 N.D.
nitrogen source Orotic (N) -1.1 +0.5 N.D. +0.3 N.D.
in planta Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +1.0 -0.6 N.D. -0.2 N.D.
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.8 +0.4 N.D. +0.7 N.D.
in planta Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +1.2 -0.7 N.D. +0.2 N.D.
carbon source D-Saccharic potassium salt (C) +0.8 +0.6 N.D. +0.2 N.D.
stress R2A with Vancomycin 0.009 mM +1.2 +0.6 N.D. -0.1 N.D.
stress Streptomycin 200 ug/mL +0.5 +2.5 N.D. +0.0 N.D.
stress Streptomycin 200 ug/mL +0.6 +2.4 N.D. +0.2 N.D.
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