Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu1299 and Atu1300 are separated by 89 nucleotidesAtu1300 and Atu1301 are separated by 8 nucleotidesAtu1301 and Atu1302 are separated by 2 nucleotidesAtu1302 and Atu1303 are separated by 42 nucleotides Atu1299: Atu1299 - 50S ribosomal protein L33, at 1,289,076 to 1,289,243 Atu1299 Atu1300: Atu1300 - MFS permease, at 1,289,333 to 1,290,508 Atu1300 Atu1301: Atu1301 - hypothetical protein, at 1,290,517 to 1,291,203 Atu1301 Atu1302: Atu1302 - hypothetical protein, at 1,291,206 to 1,291,649 Atu1302 Atu1303: Atu1303 - exoribonuclease, at 1,291,692 to 1,294,046 Atu1303
Group Condition Atu1299 Atu1300 Atu1301 Atu1302 Atu1303
stress Erythromycin 6.25 ug/mL N.D. -0.1 -0.1 +0.0 -5.3
stress Erythromycin 6.25 ug/mL N.D. +0.1 +0.4 -0.1 -5.4
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct N.D. +0.1 +0.2 -2.9 -0.8
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct N.D. +0.2 -0.8 -2.2 -0.3
stress Erythromycin 12.5 ug/mL N.D. +0.8 +0.3 +0.1 -4.3
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct N.D. -0.5 -0.4 -1.3 -0.9
in planta Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days N.D. -1.2 -0.4 -0.5 -1.0
in planta Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days N.D. -1.2 -0.5 -0.5 -0.7
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct N.D. -0.5 -0.2 -1.3 -0.5
in planta Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days N.D. -1.6 -0.1 +0.0 -1.0
stress Erythromycin 12.5 ug/mL N.D. +1.2 +0.3 -0.6 -3.5
stress Chloramphenicol 12.5 ug/mL N.D. +0.1 -0.4 -1.6 -0.5
in planta Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. -0.4 -0.1 -1.7 -0.2
in planta Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days N.D. -0.9 +0.1 -0.5 -0.9
in planta Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days N.D. -1.5 +0.3 +0.2 -1.0
lb_wheat LB_wheat N.D. -1.2 -0.2 +0.5 -0.7
stress R2A with Tetracycline 0.002 mM N.D. +0.4 +0.2 -0.4 -1.7
carbon source NAG (C) N.D. +0.3 -0.2 +0.4 -1.6
in planta Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days N.D. -1.2 +0.5 +1.1 -0.8
in planta Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days N.D. -0.7 +0.9 +0.2 -0.7
in planta Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days N.D. -0.7 +0.5 +1.0 -0.6
phage AgroPhage_D10 N.D. +1.2 -0.8 +0.2 +0.3
phage AgroPhage_F04 N.D. +1.3 +0.3 +0.6 -0.2
nitrogen source DL-2-Aminobutyric (N) N.D. +1.1 +1.8 -0.2 -0.3
carbon source D-Saccharic potassium salt (C) N.D. +1.2 +0.2 +0.5 +0.5
carbon source D-Saccharic potassium salt (C) N.D. +1.1 +0.2 +0.8 +0.6
stress Streptomycin 200 ug/mL N.D. +1.1 +0.1 +0.5 +2.5
stress Streptomycin 200 ug/mL N.D. +1.0 +0.3 +0.6 +2.4
stress R2A with Vancomycin 0.009 mM N.D. +5.7 +0.5 +0.9 +0.3
stress R2A with Vancomycin 0.009 mM N.D. +7.1 +0.5 +1.2 +0.6
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