Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu1287 and Atu1288 are separated by 395 nucleotidesAtu1288 and Atu1289 are separated by 127 nucleotidesAtu1289 and Atu1290 are separated by 90 nucleotidesAtu1290 and Atu1291 are separated by 20 nucleotides Atu1287: Atu1287 - hypothetical protein, at 1,275,148 to 1,275,342 Atu1287 Atu1288: Atu1288 - prolyl-tRNA synthetase, at 1,275,738 to 1,277,060 Atu1288 Atu1289: Atu1289 - ABC transporter, membrane spanning protein, at 1,277,188 to 1,278,495 Atu1289 Atu1290: Atu1290 - ABC transporter, nucleotide binding/ATPase protein (lipoprotein), at 1,278,586 to 1,279,194 Atu1290 Atu1291: Atu1291 - hypothetical protein, at 1,279,215 to 1,279,607 Atu1291
Group Condition Atu1287 Atu1288 Atu1289 Atu1290 Atu1291
in planta Plant=Sorghum_NK_300; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.1 N.D. N.D. N.D. -1.7
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.9 N.D. N.D. N.D. -0.8
in planta Plant=Sorghum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.4 N.D. N.D. N.D. -1.2
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.4 N.D. N.D. N.D. -1.2
phage AgroPhage_F10 -0.5 N.D. N.D. N.D. -0.9
nitrogen source L-Cysteine (N) +0.1 N.D. N.D. N.D. -1.5
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.0 N.D. N.D. N.D. -1.3
in planta Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.7 N.D. N.D. N.D. -0.5
phage AgroPhage_D04 -0.6 N.D. N.D. N.D. -0.6
in planta Plant=Sorghum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=5days -0.3 N.D. N.D. N.D. -0.8
in planta Plant=Sorghum_Btx_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.1 N.D. N.D. N.D. -1.2
stress R2A with Vancomycin 0.009 mM +0.4 N.D. N.D. N.D. -1.5
stress R2A with Zinc chloride 0.05 mM +0.2 N.D. N.D. N.D. -1.0
carbon source Myristic (C) +0.4 N.D. N.D. N.D. -1.1
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.8 N.D. N.D. N.D. +0.4
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=5days +0.6 N.D. N.D. N.D. -0.9
in planta Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +1.4 N.D. N.D. N.D. -1.1
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.5 N.D. N.D. N.D. +0.8
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -1.0 N.D. N.D. N.D. +1.3
in planta Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.6 N.D. N.D. N.D. +1.3
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +1.0 N.D. N.D. N.D. -0.3
carbon source 4-Hydroxybenzoic Acid (C) +0.3 N.D. N.D. N.D. +1.0
carbon source Cellotetraose (C) +0.4 N.D. N.D. N.D. +0.8
in planta Plant=Lettuce; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +1.4 N.D. N.D. N.D. -0.1
no phage P2L5 +0.2 N.D. N.D. N.D. +1.1
in planta Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.6 N.D. N.D. N.D. +0.8
in planta Plant=Sorghum_SS_20; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.4 N.D. N.D. N.D. +1.0
nophagecontrol No phage control +0.4 N.D. N.D. N.D. +1.1
in planta Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.3 N.D. N.D. N.D. +1.3
nitrogen source DL-2-Aminobutyric (N) +3.2 N.D. N.D. N.D. +0.9
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