Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu1286 and Atu1287 are separated by 75 nucleotidesAtu1287 and Atu1288 are separated by 395 nucleotidesAtu1288 and Atu1289 are separated by 127 nucleotidesAtu1289 and Atu1290 are separated by 90 nucleotides Atu1286: Atu1286 - hypothetical protein, at 1,274,803 to 1,275,072 Atu1286 Atu1287: Atu1287 - hypothetical protein, at 1,275,148 to 1,275,342 Atu1287 Atu1288: Atu1288 - prolyl-tRNA synthetase, at 1,275,738 to 1,277,060 Atu1288 Atu1289: Atu1289 - ABC transporter, membrane spanning protein, at 1,277,188 to 1,278,495 Atu1289 Atu1290: Atu1290 - ABC transporter, nucleotide binding/ATPase protein (lipoprotein), at 1,278,586 to 1,279,194 Atu1290
Group Condition Atu1286 Atu1287 Atu1288 Atu1289 Atu1290
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -2.7 -0.9 N.D. N.D. N.D.
carbon source D-Galacturonic Acid (C) -3.1 -0.3 N.D. N.D. N.D.
carbon source L-Sorbose (C) -3.1 -0.1 N.D. N.D. N.D.
carbon source D-Galacturonic Acid (C) -3.1 +0.1 N.D. N.D. N.D.
carbon source D-Saccharic potassium salt (C) -2.4 -0.5 N.D. N.D. N.D.
carbon source NAG (C) -2.9 +0.1 N.D. N.D. N.D.
carbon source L-Sorbose (C) -2.9 +0.2 N.D. N.D. N.D.
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -2.1 -0.6 N.D. N.D. N.D.
carbon source L-Xylose (C) -2.2 -0.0 N.D. N.D. N.D.
carbon source NAG (C) -2.8 +0.6 N.D. N.D. N.D.
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -2.1 -0.0 N.D. N.D. N.D.
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -2.3 +0.2 N.D. N.D. N.D.
carbon source D-Saccharic potassium salt (C) -2.1 +0.1 N.D. N.D. N.D.
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -1.7 -0.2 N.D. N.D. N.D.
carbon source L-Xylose (C) -2.2 +0.4 N.D. N.D. N.D.
carbon source Methyl alpha-D-glucopyranoside (C) -1.6 -0.1 N.D. N.D. N.D.
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -1.8 +0.1 N.D. N.D. N.D.
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -2.0 +0.4 N.D. N.D. N.D.
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -2.0 +0.3 N.D. N.D. N.D.
carbon source Xylitol (C) -1.8 +0.2 N.D. N.D. N.D.
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -1.9 +0.3 N.D. N.D. N.D.
carbon source D-Arabinose (C) -1.7 +0.1 N.D. N.D. N.D.
carbon source methyl-alpha-D-xylopyranoside (C) -1.7 +0.3 N.D. N.D. N.D.
carbon source Phloretic Acid (C) -1.7 +0.3 N.D. N.D. N.D.
carbon source D-(-)-lyxose (C) -1.4 +0.3 N.D. N.D. N.D.
carbon source 4-Aminobutyric (C) -1.4 +0.3 N.D. N.D. N.D.
carbon source sarcosine (C) -1.5 +0.6 N.D. N.D. N.D.
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -1.9 +1.0 N.D. N.D. N.D.
in planta Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.6 +1.4 N.D. N.D. N.D.
nitrogen source DL-2-Aminobutyric (N) -0.1 +3.2 N.D. N.D. N.D.
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