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Protein
Homologs
Fitness for 5 genes in
Agrobacterium fabrum C58
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Atu1245 and Atu1246 are separated by 131 nucleotides
Atu1246 and Atu1247 are separated by 2 nucleotides
Atu1247 and Atu1248 are separated by 252 nucleotides
Atu1248 and Atu1249 are separated by 506 nucleotides
Atu1245: Atu1245 - agmatinase, at 1,234,949 to 1,235,902
Atu1245
Atu1246: Atu1246 - 30S ribosomal protein S9, at 1,236,034 to 1,236,501
Atu1246
Atu1247: Atu1247 - 50S ribosomal protein L13, at 1,236,504 to 1,236,968
Atu1247
Atu1248: Atu1248 - hypothetical protein, at 1,237,221 to 1,238,057
Atu1248
Atu1249: Atu1249 - hypothetical protein, at 1,238,564 to 1,238,836
Atu1249
Group
Condition
Atu1245
Atu1246
Atu1247
Atu1248
Atu1249
in planta
Plant=Sorghum_Btx_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct
-0.5
N.D.
N.D.
-0.3
-0.6
Atjh15
-0.4
N.D.
N.D.
+0.0
-1.0
stress
Chloramphenicol 12.5 ug/mL
-0.3
N.D.
N.D.
-0.2
-0.7
Atjh2
-0.0
N.D.
N.D.
-0.4
-0.7
in planta
Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct
-0.1
N.D.
N.D.
-0.3
-0.6
Atjh2
-0.1
N.D.
N.D.
-0.3
-0.5
in planta
Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days
-0.2
N.D.
N.D.
-0.1
-0.5
in planta
Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct
-0.6
N.D.
N.D.
-0.2
+0.0
in planta
Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days
-0.3
N.D.
N.D.
-0.2
-0.3
in planta
Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct
-0.1
N.D.
N.D.
+0.1
-0.7
in planta
Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct
+0.0
N.D.
N.D.
-0.1
-0.7
Atjh15
+0.2
N.D.
N.D.
-0.3
-0.7
stress
R2A with m-arsenite 0.8 mM
+0.2
N.D.
N.D.
-0.1
-0.9
Atjh14
-0.4
N.D.
N.D.
-0.4
+0.1
in planta
Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct
+0.3
N.D.
N.D.
-0.2
-0.7
in planta
Bethi_Library_OD0.1
-0.1
N.D.
N.D.
+0.1
-0.6
No phage control
+0.3
N.D.
N.D.
-0.1
-0.7
in planta
Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct
-0.5
N.D.
N.D.
-0.3
+0.3
carbon source
D-Saccharic potassium salt (C)
+0.3
N.D.
N.D.
-0.2
-0.5
in planta
Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct
+0.2
N.D.
N.D.
+0.1
-0.7
Atjh10
+0.3
N.D.
N.D.
-0.1
-0.4
in planta
Plant=Sorghum_SS_20; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct
+0.5
N.D.
N.D.
-0.3
-0.1
phage
AgroPhage_D04
+0.4
N.D.
N.D.
-0.3
+0.1
in planta
Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days
-0.4
N.D.
N.D.
+0.1
+0.5
phage
AgroPhage_E10
-0.3
N.D.
N.D.
+0.2
+0.5
in planta
Plant=Sorghum_Btx_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct
-0.2
N.D.
N.D.
-0.1
+0.8
in planta
Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct
-0.0
N.D.
N.D.
-0.1
+0.8
in planta
Plant=Arabidopsis_efr; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days
+0.2
N.D.
N.D.
+0.1
+0.5
nitrogen source
DL-2-Aminobutyric (N)
+0.4
N.D.
N.D.
-0.1
+0.6
in planta
Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct
+0.6
N.D.
N.D.
-0.0
+0.5
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