Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu1235 and Atu1236 overlap by 4 nucleotidesAtu1236 and Atu1237 are separated by 223 nucleotidesAtu1237 and Atu1238 overlap by 23 nucleotidesAtu1238 and Atu1239 are separated by 210 nucleotides Atu1235: Atu1235 - hypothetical protein, at 1,223,075 to 1,224,316 Atu1235 Atu1236: Atu1236 - polysaccharide biosynthesis glycosyltransferase, at 1,224,313 to 1,225,866 Atu1236 Atu1237: Atu1237 - glycosyl transferase, at 1,226,090 to 1,227,271 Atu1237 Atu1238: Atu1238 - polysaccharide export protein, at 1,227,249 to 1,227,821 Atu1238 Atu1239: Atu1239 - exopolysaccharide production protein, at 1,228,032 to 1,230,293 Atu1239
Group Condition Atu1235 Atu1236 Atu1237 Atu1238 Atu1239
in planta Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.8 -1.0 -0.8 -1.3 -0.9
in planta Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.5 -0.9 -0.8 -1.1 -0.8
in planta Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.7 -0.8 -0.4 -1.1 -0.9
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days -0.2 -1.3 -0.2 -1.6 -0.5
in planta Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.6 -0.8 -0.4 -1.0 -0.8
in planta Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.4 -0.6 -0.3 -1.6 -0.7
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days -0.3 -0.9 -0.3 -1.2 -0.6
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.3 -1.3 -0.1 -1.4 -0.3
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days -0.4 -1.1 -0.2 -1.1 -0.6
in planta Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.5 -0.9 -0.2 -1.1 -0.6
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.2 -1.3 +0.0 -1.3 -0.3
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.0 -1.5 -0.0 -1.5 -0.0
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.2 -1.1 -0.0 -1.4 -0.2
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.1 -1.0 -0.1 -1.3 -0.4
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days -0.0 -1.0 -0.2 -1.3 -0.4
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days -0.2 -0.8 -0.3 -1.2 -0.5
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.1 -0.8 +0.0 -1.7 -0.3
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.2 -1.0 +0.1 -1.3 -0.4
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.2 +0.8 +1.2 -0.4 +0.4
carbon source Cellopentaose (C) +0.7 +0.7 +0.6 +0.5 +0.4
carbon source Betanin (C) +0.7 +0.7 +0.6 +0.8 +0.4
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.7 +0.8 +0.7 +0.7 +0.3
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.4 +1.5 +0.0 +0.7 +0.6
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +1.0 +0.8 +0.1 +0.8 +0.6
nitrogen source D-Lysine (N) +0.8 +0.8 +0.6 +0.7 +0.5
stress Acetovanillone 5 mM +0.8 +0.8 +0.6 +0.6 +0.5
in planta Plant=Lettuce; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days +0.7 +0.6 +0.8 +0.7 +0.6
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.7 +0.9 +0.4 +1.0 +0.5
carbon source Betanin (C) +0.8 +1.0 +0.7 +0.8 +0.5
nitrogen source DL-2-Aminobutyric (N) +2.0 +1.8 +1.9 +0.1 +0.5
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