Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu1221 and Atu1222 are separated by 137 nucleotidesAtu1222 and Atu1223 are separated by 66 nucleotidesAtu1223 and Atu1224 are separated by 543 nucleotidesAtu1224 and Atu1225 are separated by 176 nucleotides Atu1221: Atu1221 - hypothetical protein, at 1,214,843 to 1,215,286 Atu1221 Atu1222: Atu1222 - hypothetical protein, at 1,215,424 to 1,216,155 Atu1222 Atu1223: Atu1223 - hypothetical protein, at 1,216,222 to 1,216,578 Atu1223 Atu1224: Atu1224 - tRNA-Asn, at 1,217,122 to 1,217,196 Atu1224 Atu1225: Atu1225 - hypothetical protein, at 1,217,373 to 1,217,645 Atu1225
Group Condition Atu1221 Atu1222 Atu1223 Atu1224 Atu1225
in planta Plant=Sorghum_X54_243; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.1 +0.3 -0.1 N.D. -5.3
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.4 -0.2 +0.4 N.D. -5.4
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.4 +0.2 +0.5 N.D. -5.4
stress R2A with tungstate 375 mM -0.0 +0.1 -3.1 N.D. -1.3
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -1.4 +0.0 +0.1 N.D. -2.6
phage AgroPhage_E04 -0.8 -0.1 -2.5 N.D. +0.3
in planta Plant=Sorghum_SS_20; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.3 -0.4 +0.5 N.D. -3.6
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.8 -0.1 +0.1 N.D. -3.9
carbon source Asolectin from soybean (C) -0.2 +0.1 -0.1 N.D. -2.8
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.3 +0.1 -0.2 N.D. -2.4
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.2 -0.1 -0.0 N.D. -2.7
lb LB +0.1 -0.2 +0.5 N.D. -2.3
in planta Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.6 +0.0 -1.0 N.D. -1.4
in planta Plant=Sorghum_Btx_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.5 +0.1 -0.5 N.D. -1.8
in planta Plant=Sorghum_Btx_642; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.6 +0.4 +0.5 N.D. -3.3
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.6 -0.1 -2.2 N.D. +0.4
stress Streptomycin 200 ug/mL -0.7 -0.0 +0.9 N.D. -1.3
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days +0.1 -0.1 +0.8 N.D. -1.9
in planta Bethi_Library_OD0.5 -0.0 -0.3 -1.5 N.D. +1.5
phage AgroPhage_C10 -0.4 -0.4 -1.1 N.D. +1.6
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.2 +0.1 +2.0 N.D. -2.2
nophagecontrol No phage control +0.3 -0.2 +1.0 N.D. -1.3
phage AgroPhage_E10 -0.6 +0.4 -0.8 N.D. +1.0
in planta Plant=Cucumber; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.2 -0.1 +1.8 N.D. -1.0
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.2 +0.2 +3.0 N.D. -2.1
in planta Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.8 +0.2 +1.1 N.D. -0.9
nitrogen source L-Arginine (N) +0.2 +0.1 +1.1 N.D. +1.2
phage phage 99.2 +0.2 +0.1 +2.3 N.D. +0.1
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.0 +0.0 +0.2 N.D. +2.8
in planta Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.3 +0.0 +2.1 N.D. +0.9
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