Fitness for 5 genes in Agrobacterium fabrum C58

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	Atu1213	Atu1214	Atu1215	Atu1216	Atu1217
in planta	Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	-3.0	-0.4	+0.1	+0.0	-0.0
in planta	Plant=Arabidopsis_efr; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=5days	-2.2	+0.0	-0.3	-0.4	-0.2
stress	R2A with m-arsenite 0.8 mM	-1.3	-0.0	-0.8	+0.4	-1.1
in planta	Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	-2.4	+0.1	+0.2	-0.2	-0.4
in planta	Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	-2.2	+0.3	+0.2	-0.1	-0.9
in planta	Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days	-1.1	+0.1	-0.5	-0.7	-0.2
in planta	Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	-2.7	-0.1	+0.7	+0.2	-0.3
in planta	Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	-1.6	-1.1	+0.1	+0.4	+0.2
phage	AgroPhage_E04	+0.6	-0.6	-0.0	-0.9	-0.9
in planta	Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	-1.5	-0.4	+0.2	-0.0	-0.0
carbon source	D-Saccharic potassium salt (C)	-1.3	-0.0	+0.5	-0.2	-0.4
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-1.2	-0.2	+0.3	+0.3	-0.5
phage	AgroPhage_E10	+0.6	+0.0	-1.0	-0.6	-0.2
in planta	Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	-0.8	-0.1	+0.3	-0.7	+0.4
phage	AgroPhage_D04	-0.9	-0.3	-0.3	+0.4	+0.3
stress	R2A with Tetracycline 0.002 mM	-1.4	-0.1	+0.4	+0.0	+0.5
nitrogen source	nitrate (N)	+0.8	+0.2	+0.0	-0.0	-1.2
in planta	Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	-0.9	+0.7	+0.4	+0.2	-0.1
in planta	Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days	+1.2	+0.3	-0.3	-0.6	+0.1
in planta	Plant=Sorghum_X54_243; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	+1.4	-0.1	+0.4	-0.1	-0.2
nophagecontrol	No phage control	+0.8	-0.5	+0.4	+0.5	+0.2
in planta	Plant=Sorghum_Btx_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	+1.7	+0.3	-0.1	-0.1	-0.2
in planta	Plant=Sorghum_Btx_642; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	+2.0	+0.1	-0.3	-0.0	-0.1
nitrogen source	DL-2-Aminobutyric (N)	+0.4	+0.9	+0.4	+0.6	-0.6
in planta	Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	+1.8	-0.1	+0.4	-0.1	-0.3
in planta	Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	+2.2	+0.5	-0.5	-0.6	+0.4
agar plate interaction control	Parafilmed volatile agar plate with no fungus	+0.5	+1.1	+0.4	-0.1	+0.2
in planta	Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	+2.3	-0.4	+0.1	+0.2	+0.3
stress	R2A with Vancomycin 0.009 mM	+2.5	+0.1	+0.2	+0.1	-0.2
stress	R2A with Vancomycin 0.009 mM	+3.1	+0.1	+0.5	+0.1	-0.7