Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu1212 and Atu1213 are separated by 340 nucleotidesAtu1213 and Atu1214 are separated by 51 nucleotidesAtu1214 and Atu1215 are separated by 219 nucleotidesAtu1215 and Atu1216 are separated by 16 nucleotides Atu1212: Atu1212 - hypothetical protein, at 1,206,334 to 1,206,801 Atu1212 Atu1213: Atu1213 - hypothetical protein, at 1,207,142 to 1,207,849 Atu1213 Atu1214: Atu1214 - DNA-binding protein, at 1,207,901 to 1,208,545 Atu1214 Atu1215: Atu1215 - thiosulfate sulfurtransferase, at 1,208,765 to 1,210,186 Atu1215 Atu1216: Atu1216 - alanyl-tRNA synthetase, at 1,210,203 to 1,210,940 Atu1216
Group Condition Atu1212 Atu1213 Atu1214 Atu1215 Atu1216
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.0 -3.0 -0.4 +0.1 +0.0
in planta Plant=Arabidopsis_efr; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=5days -0.1 -2.2 +0.0 -0.3 -0.4
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.1 -2.4 +0.1 +0.2 -0.2
in planta Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.1 -1.1 +0.1 -0.5 -0.7
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.2 -2.7 -0.1 +0.7 +0.2
in planta Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.3 -1.6 -1.1 +0.1 +0.4
stress R2A with m-arsenite 0.8 mM +0.0 -1.3 -0.0 -0.8 +0.4
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.1 -2.2 +0.3 +0.2 -0.1
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.4 -1.5 -0.4 +0.2 -0.0
phage AgroPhage_E04 -0.3 +0.6 -0.6 -0.0 -0.9
carbon source D-Saccharic potassium salt (C) +0.1 -1.3 -0.0 +0.5 -0.2
phage AgroPhage_E10 -0.1 +0.6 +0.0 -1.0 -0.6
stress R2A with Tetracycline 0.002 mM +0.2 -1.4 -0.1 +0.4 +0.0
in planta Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.1 -1.4 -0.0 +0.3 +0.3
phage AgroPhage_D04 +0.4 -0.9 -0.3 -0.3 +0.4
in planta Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.3 +1.2 +0.3 -0.3 -0.6
nophagecontrol No phage control -0.0 +0.8 -0.5 +0.4 +0.5
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.8 -0.9 +0.7 +0.4 +0.2
in planta Plant=Sorghum_NK_300; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.2 +0.9 -0.4 +0.5 +0.1
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.1 +2.2 +0.5 -0.5 -0.6
in planta Plant=Sorghum_Btx_642; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.1 +2.0 +0.1 -0.3 -0.0
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.2 +1.8 -0.1 +0.4 -0.1
in planta Plant=Sorghum_X54_243; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.3 +1.4 -0.1 +0.4 -0.1
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.1 +0.5 +1.1 +0.4 -0.1
in planta Plant=Sorghum_X54_243; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.2 +0.7 -0.2 +0.5 +0.7
in planta Plant=Sorghum_Btx_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.1 +1.7 +0.3 -0.1 -0.1
nitrogen source DL-2-Aminobutyric (N) -0.1 +0.4 +0.9 +0.4 +0.6
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.4 +2.3 -0.4 +0.1 +0.2
stress R2A with Vancomycin 0.009 mM +0.3 +2.5 +0.1 +0.2 +0.1
stress R2A with Vancomycin 0.009 mM +0.1 +3.1 +0.1 +0.5 +0.1
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