Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu1206 and Atu1207 are separated by 217 nucleotidesAtu1207 and Atu1208 are separated by 39 nucleotidesAtu1208 and Atu1209 are separated by 150 nucleotidesAtu1209 and Atu1210 are separated by 195 nucleotides Atu1206: Atu1206 - hypothetical protein, at 1,199,961 to 1,200,272 Atu1206 Atu1207: Atu1207 - GGDEF family protein, at 1,200,490 to 1,201,755 Atu1207 Atu1208: Atu1208 - acyl-carrier-protein phosphodiesterase, at 1,201,795 to 1,202,412 Atu1208 Atu1209: Atu1209 - transcriptional regulator, LysR family, at 1,202,563 to 1,203,531 Atu1209 Atu1210: Atu1210 - putative 2,3-cyclic nucleotide 2-phosphodiesterase/3-nucleotidase, at 1,203,727 to 1,205,715 Atu1210
Group Condition Atu1206 Atu1207 Atu1208 Atu1209 Atu1210
stress syringaldehyde 1.25 mM -0.2 +0.0 -1.1 -1.3 +0.1
stress syringaldehyde 1.25 mM -0.2 -0.0 -1.3 -1.0 +0.1
stress syringaldehyde 0.5 mM -0.0 +0.1 -0.9 -0.9 +0.2
stress syringaldehyde 0.5 mM -0.1 +0.1 -0.7 -0.5 +0.0
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.2 -0.3 +0.1 -0.2 -0.4
in planta Plant=Lettuce; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days -0.2 +0.2 -0.3 -0.3 +0.3
in planta Plant=Sorghum_NK_300; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.4 -0.2 +0.2 -0.5 -0.0
in planta Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.3 -0.1 -0.3 -0.4 +0.4
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.7 -0.3 -0.1 +0.0 -0.5
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.4 -0.3 +0.2 -0.6 +0.2
in planta Plant=Sorghum_Btx_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.2 -0.2 -0.2 -0.3 +0.6
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.7 +0.1 -0.4 -0.1 -0.1
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.5 -0.1 +0.1 -0.4 +0.3
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.1 +0.1 +0.8 -0.6 +0.1
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.6 -0.1 -0.3 +0.2 +0.3
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.7 -0.0 +0.7 +0.8 -0.0
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.2 +0.2 +0.8 -0.4 +0.0
in planta Plant=Sorghum_SS_20; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.3 +0.7 -0.2 +0.3 -0.0
no phage P2L5 -0.2 +0.4 +0.2 +0.4 +0.1
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.1 -0.2 +0.7 +0.4 +0.1
stress Acetosyringone 5 mM -0.1 +0.0 +0.9 +0.4 +0.0
in planta Plant=Sorghum_X54_243; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.4 +0.4 +0.4 -0.1 +0.2
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.2 +0.4 +0.2 +0.5 +0.1
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.0 +0.4 +0.2 +0.5 +0.2
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.9 +0.3 +0.0 +0.0 +0.1
in planta Plant=Sorghum_SS_20; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.4 +0.2 +0.4 +0.2 +0.2
stress Acetosyringone 5 mM +0.2 +0.2 +0.6 +0.5 +0.0
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.5 +0.4 +0.1 +0.4 +0.3
in planta Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.5 +0.3 +0.1 +0.7 +0.2
nitrogen source DL-2-Aminobutyric (N) +0.3 +0.5 +0.2 +1.3 +0.7
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