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Protein
Homologs
Fitness for 5 genes in
Agrobacterium fabrum C58
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Atu1206 and Atu1207 are separated by 217 nucleotides
Atu1207 and Atu1208 are separated by 39 nucleotides
Atu1208 and Atu1209 are separated by 150 nucleotides
Atu1209 and Atu1210 are separated by 195 nucleotides
Atu1206: Atu1206 - hypothetical protein, at 1,199,961 to 1,200,272
Atu1206
Atu1207: Atu1207 - GGDEF family protein, at 1,200,490 to 1,201,755
Atu1207
Atu1208: Atu1208 - acyl-carrier-protein phosphodiesterase, at 1,201,795 to 1,202,412
Atu1208
Atu1209: Atu1209 - transcriptional regulator, LysR family, at 1,202,563 to 1,203,531
Atu1209
Atu1210: Atu1210 - putative 2,3-cyclic nucleotide 2-phosphodiesterase/3-nucleotidase, at 1,203,727 to 1,205,715
Atu1210
Group
Condition
Atu1206
Atu1207
Atu1208
Atu1209
Atu1210
stress
syringaldehyde 1.25 mM
-0.2
+0.0
-1.1
-1.3
+0.1
stress
syringaldehyde 1.25 mM
-0.2
-0.0
-1.3
-1.0
+0.1
stress
syringaldehyde 0.5 mM
-0.0
+0.1
-0.9
-0.9
+0.2
stress
syringaldehyde 0.5 mM
-0.1
+0.1
-0.7
-0.5
+0.0
in planta
Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct
-0.2
-0.3
+0.1
-0.2
-0.4
in planta
Plant=Lettuce; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days
-0.2
+0.2
-0.3
-0.3
+0.3
in planta
Plant=Sorghum_NK_300; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct
+0.4
-0.2
+0.2
-0.5
-0.0
in planta
Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days
+0.3
-0.1
-0.3
-0.4
+0.4
in planta
Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct
+0.7
-0.3
-0.1
+0.0
-0.5
in planta
Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct
+0.4
-0.3
+0.2
-0.6
+0.2
in planta
Plant=Sorghum_Btx_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct
+0.2
-0.2
-0.2
-0.3
+0.6
in planta
Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct
+0.7
+0.1
-0.4
-0.1
-0.1
in planta
Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct
+0.5
-0.1
+0.1
-0.4
+0.3
in planta
Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct
+0.1
+0.1
+0.8
-0.6
+0.1
in planta
Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct
+0.6
-0.1
-0.3
+0.2
+0.3
in planta
Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct
-0.7
-0.0
+0.7
+0.8
-0.0
in planta
Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct
+0.2
+0.2
+0.8
-0.4
+0.0
in planta
Plant=Sorghum_SS_20; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct
+0.3
+0.7
-0.2
+0.3
-0.0
no phage
P2L5
-0.2
+0.4
+0.2
+0.4
+0.1
in planta
Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct
+0.1
-0.2
+0.7
+0.4
+0.1
stress
Acetosyringone 5 mM
-0.1
+0.0
+0.9
+0.4
+0.0
in planta
Plant=Sorghum_X54_243; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct
+0.4
+0.4
+0.4
-0.1
+0.2
in planta
Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct
+0.2
+0.4
+0.2
+0.5
+0.1
in planta
Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days
+0.0
+0.4
+0.2
+0.5
+0.2
in planta
Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct
+0.9
+0.3
+0.0
+0.0
+0.1
in planta
Plant=Sorghum_SS_20; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct
+0.4
+0.2
+0.4
+0.2
+0.2
stress
Acetosyringone 5 mM
+0.2
+0.2
+0.6
+0.5
+0.0
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
+0.5
+0.4
+0.1
+0.4
+0.3
in planta
Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days
+0.5
+0.3
+0.1
+0.7
+0.2
nitrogen source
DL-2-Aminobutyric (N)
+0.3
+0.5
+0.2
+1.3
+0.7
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