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Protein
Homologs
Fitness for 5 genes in
Agrobacterium fabrum C58
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Number of genes on each side:
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Atu1202 and Atu1203 are separated by 333 nucleotides
Atu1203 and Atu1204 are separated by 106 nucleotides
Atu1204 and Atu1205 are separated by 200 nucleotides
Atu1205 and Atu1206 are separated by 74 nucleotides
Atu1202: Atu1202 - ABC transporter, substrate binding protein, at 1,194,886 to 1,196,379
Atu1202
Atu1203: Atu1203 - hypothetical protein, at 1,196,713 to 1,196,967
Atu1203
Atu1204: Atu1204 - potassium uptake protein, at 1,197,074 to 1,198,411
Atu1204
Atu1205: Atu1205 - threonine dehydratase, at 1,198,612 to 1,199,886
Atu1205
Atu1206: Atu1206 - hypothetical protein, at 1,199,961 to 1,200,272
Atu1206
Group
Condition
Atu1202
Atu1203
Atu1204
Atu1205
Atu1206
carbon source
Xylobiose (C)
-0.0
-0.1
-0.2
-8.3
+0.2
carbon source
NAG (C)
+0.1
-0.5
-1.4
-6.5
-0.0
carbon source
methyl 3-keto-a-D-glucopyranoside (C)
-0.0
-0.0
-0.5
-7.7
-0.1
carbon source
NAG (C)
+0.1
-0.3
-1.3
-6.7
-0.1
carbon source
NAG (C)
+0.1
-0.0
-0.4
-7.9
+0.2
carbon source
D-Mannose (C)
-0.1
+0.0
-0.6
-7.3
+0.0
carbon source
Cellotetraose (C)
+0.0
-0.6
+0.3
-7.7
+0.1
carbon source
D-Glucose (C)
-0.1
-0.0
-0.4
-7.2
-0.0
carbon source
methyl-beta-D-xylopyranoside (C)
+0.1
-0.3
-0.8
-6.8
+0.2
carbon source
Protocatechuic Acid (C)
-0.0
-0.0
-0.6
-6.8
-0.2
carbon source
L-Galactose (C)
+0.0
+0.1
-0.4
-7.3
-0.0
carbon source
Ribitol (C)
+0.2
-0.6
-0.1
-7.1
+0.0
carbon source
D-Glucuronic gamma lactone (C)
+0.1
-0.2
-0.3
-7.2
+0.1
carbon source
D-Quinic (C)
-0.0
+0.1
-0.5
-7.0
+0.0
carbon source
D-Glucose-6-Phosphate (C)
+0.1
-0.4
+0.2
-7.5
+0.3
carbon source
D-Trehalose (C)
-0.0
-0.4
+0.1
-7.2
+0.2
carbon source
Cellotetraose (C)
-0.0
+0.1
-0.2
-7.5
+0.3
carbon source
L-Sorbose (C)
+0.1
-0.0
-0.4
-6.8
-0.2
in planta
Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days
+0.1
-1.1
-0.9
-5.5
+0.1
carbon source
m-Inositol (C)
-0.1
-0.2
-0.2
-7.0
+0.1
carbon source
m-Inositol (C)
+0.1
+0.2
-0.3
-7.4
+0.1
carbon source
D-Fructose (C)
+0.1
-0.3
+0.1
-7.2
+0.1
carbon source
palatinose (C)
+0.1
-0.5
+0.1
-6.8
+0.1
carbon source
L-Galactose (C)
+0.0
-0.1
-0.4
-6.9
+0.3
carbon source
D-Raffinose (C)
+0.1
-0.4
+0.4
-7.0
+0.1
carbon source
methyl-beta-D-xylopyranoside (C)
-0.0
+0.6
-0.5
-6.9
+0.1
carbon source
Xylobiose (C)
+0.1
+0.3
-0.4
-6.7
+0.1
carbon source
D-Maltose (C)
-0.0
+0.1
+0.5
-7.4
+0.2
carbon source
Xylitol (C)
+0.0
-0.6
-0.3
-6.3
+0.6
carbon source
Xylobiose (C)
+0.1
+0.3
-0.4
-6.6
+0.1
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