Fitness for 5 genes in Agrobacterium fabrum C58

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 953 experiments or choose conditions or try the comparative fitness browser

500 ntAtu1195 and Atu1196 are separated by 15 nucleotidesAtu1196 and Atu1197 are separated by 11 nucleotidesAtu1197 and Atu1198 are separated by 74 nucleotidesAtu1198 and Atu1199 overlap by 11 nucleotides Atu1195: Atu1195 - heavy-metal transporting P-type ATPase, at 1,186,479 to 1,188,989 Atu1195 Atu1196: Atu1196 - naphthalene 1,2-dioxygenase, at 1,189,005 to 1,190,012 Atu1196 Atu1197: Atu1197 - transcriptional regulator, MerR family, at 1,190,024 to 1,190,512 Atu1197 Atu1198: Atu1198 - ABC transporter, membrane spanning protein, at 1,190,587 to 1,191,531 Atu1198 Atu1199: Atu1199 - ABC transporter, membrane spanning protein, at 1,191,521 to 1,192,426 Atu1199
Group Condition Atu1195 Atu1196 Atu1197 Atu1198 Atu1199
phage AgroPhage_F03 -0.2 -0.4 -0.4 +0.1 -0.3
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days +0.1 -0.3 -0.3 -0.1 -0.4
in planta Plant=Sorghum_NK_300; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.1 -0.2 -0.5 -0.2 +0.1
nophagecontrol No phage control -0.0 +0.1 -0.5 -0.2 -0.1
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.0 +0.1 -0.3 -0.5 +0.1
in planta Plant=Sorghum_Btx_642; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.1 -0.5 +0.1 -0.3 -0.1
phage AgroPhage_E04 +0.1 -0.4 +0.3 -0.2 -0.3
in planta Plant=Sorghum_Btx_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.2 -0.2 -0.5 +0.2 -0.0
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.0 -0.1 -0.3 -0.3 +0.4
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.1 +0.2 -0.6 -0.2 +0.2
in planta Plant=Sorghum_NK_300; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.1 +0.1 -0.2 -0.3 +0.3
in planta Plant=Sorghum_Btx_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.2 +0.1 -0.4 -0.1 +0.2
in planta Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.2 +1.1 -0.6 -0.4 -0.3
lb_sorghum_leaf LB_sorghum_leaf +0.1 +0.2 -0.3 -0.3 +0.1
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.4 -0.1 -0.4 +0.1 +0.0
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.0 +0.3 -0.6 +0.3 -0.0
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.0 +0.2 -0.4 +0.0 +0.3
in planta Plant=Sorghum_NK_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.2 -0.1 -0.2 -0.1 +0.4
stress R2A with Vancomycin 0.009 mM -0.1 +0.4 +0.0 +0.2 -0.2
phage AgroPhage_E10 +0.2 -0.2 +0.3 -0.1 +0.1
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.2 +0.4 -0.2 +0.1 -0.1
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.3 +0.5 -0.3 -0.3 +0.3
in planta Plant=Sorghum_Btx_642; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.1 +0.3 +0.3 -0.3 +0.3
in planta Plant=Sorghum_X54_243; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.2 -0.2 +0.1 +0.3 +0.3
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.0 +0.5 +0.3 -0.1 +0.2
phage AgroPhage_C10 -0.1 +0.4 -0.1 +0.3 +0.4
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.3 +0.0 -0.2 +0.2 +0.7
nophagecontrol No phage control +0.1 +0.5 +0.3 +0.0 +0.2
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.2 +0.3 +0.2 -0.1 +0.7
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.2 +0.4 +0.4 +0.4 +0.4
remove
Atu1195
plot		 remove
Atu1196
plot		 remove
Atu1197		 remove
Atu1198
plot		 remove
Atu1199
plot