Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu1178 and Atu1179 are separated by 4 nucleotidesAtu1179 and Atu1180 are separated by 241 nucleotidesAtu1180 and Atu1181 are separated by 274 nucleotidesAtu1181 and Atu1182 are separated by 85 nucleotides Atu1178: Atu1178 - fatty acid/phospholipid synthesis protein, at 1,171,495 to 1,172,556 Atu1178 Atu1179: Atu1179 - 3-oxoacyl-(acyl-carrier-protein) synthase III, at 1,172,561 to 1,173,532 Atu1179 Atu1180: Atu1180 - integration host factor alpha subunit, at 1,173,774 to 1,174,112 Atu1180 Atu1181: Atu1181 - hypothetical protein, at 1,174,387 to 1,174,920 Atu1181 Atu1182: Atu1182 - hypothetical protein, at 1,175,006 to 1,175,734 Atu1182
Group Condition Atu1178 Atu1179 Atu1180 Atu1181 Atu1182
in planta Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. N.D. N.D. N.D. -5.6
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct N.D. N.D. N.D. N.D. -3.9
phage phage 95.1 N.D. N.D. N.D. N.D. -3.2
phage AgroPhage_E04 N.D. N.D. N.D. N.D. -2.7
phage AgroPhage_F10 N.D. N.D. N.D. N.D. -2.5
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct N.D. N.D. N.D. N.D. -2.3
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct N.D. N.D. N.D. N.D. -2.3
stress R2A with Cephalothin 0.9 mM N.D. N.D. N.D. N.D. -2.2
phage AgroPhage_E10 N.D. N.D. N.D. N.D. -2.1
phage AgroPhage_C04 N.D. N.D. N.D. N.D. -1.7
carbon source Lactitol (C) N.D. N.D. N.D. N.D. -1.6
phage phage 99.2 N.D. N.D. N.D. N.D. -1.6
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct N.D. N.D. N.D. N.D. -1.6
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct N.D. N.D. N.D. N.D. -1.5
in planta Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days N.D. N.D. N.D. N.D. -1.5
carbon source D-Cellobiose (C) N.D. N.D. N.D. N.D. -1.5
carbon source Betanin (C) N.D. N.D. N.D. N.D. -1.5
carbon source D-Glucose (C) N.D. N.D. N.D. N.D. -1.5
in planta Plant=Sorghum_NK_300; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. N.D. N.D. N.D. -1.4
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=1days N.D. N.D. N.D. N.D. -1.4
in planta Plant=Sorghum_X54_243; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. N.D. N.D. N.D. -1.4
in planta Plant=Lettuce; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days N.D. N.D. N.D. N.D. -1.4
carbon source Methyl alpha-D-glucopyranoside (C) N.D. N.D. N.D. N.D. -1.3
stress R2A with Kanamycin sulfate 0.02 mM N.D. N.D. N.D. N.D. -1.3
nophagecontrol No phage control N.D. N.D. N.D. N.D. -1.3
in planta Plant=Sorghum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days N.D. N.D. N.D. N.D. +1.3
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. N.D. N.D. N.D. +1.3
stress Rosmarinic 5 mM N.D. N.D. N.D. N.D. +1.3
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days N.D. N.D. N.D. N.D. +1.4
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant N.D. N.D. N.D. N.D. +1.9
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