Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu1176 and Atu1177 are separated by 11 nucleotidesAtu1177 and Atu1178 are separated by 100 nucleotidesAtu1178 and Atu1179 are separated by 4 nucleotidesAtu1179 and Atu1180 are separated by 241 nucleotides Atu1176: Atu1176 - hypothetical protein, at 1,170,283 to 1,170,819 Atu1176 Atu1177: Atu1177 - hypothetical protein, at 1,170,831 to 1,171,394 Atu1177 Atu1178: Atu1178 - fatty acid/phospholipid synthesis protein, at 1,171,495 to 1,172,556 Atu1178 Atu1179: Atu1179 - 3-oxoacyl-(acyl-carrier-protein) synthase III, at 1,172,561 to 1,173,532 Atu1179 Atu1180: Atu1180 - integration host factor alpha subunit, at 1,173,774 to 1,174,112 Atu1180
Group Condition Atu1176 Atu1177 Atu1178 Atu1179 Atu1180
stress R2A with m-arsenite 0.8 mM -0.7 -1.9 N.D. N.D. N.D.
stress R2A with m-arsenite 0.8 mM -0.6 -2.0 N.D. N.D. N.D.
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.6 -1.4 N.D. N.D. N.D.
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -1.8 -0.0 N.D. N.D. N.D.
phage phage 100.3 -0.4 -1.1 N.D. N.D. N.D.
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.8 -0.8 N.D. N.D. N.D.
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.1 -1.5 N.D. N.D. N.D.
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -1.0 -0.4 N.D. N.D. N.D.
nophagecontrol No phage control -1.0 -0.4 N.D. N.D. N.D.
in planta Plant=Sorghum_Btx_642; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.7 -0.7 N.D. N.D. N.D.
in planta Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.8 -0.5 N.D. N.D. N.D.
phage phage 100.2 -0.8 -0.5 N.D. N.D. N.D.
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days -0.9 -0.4 N.D. N.D. N.D.
no phage P2L5 -0.0 -1.3 N.D. N.D. N.D.
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days -0.7 -0.5 N.D. N.D. N.D.
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.1 -1.2 N.D. N.D. N.D.
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.6 -0.6 N.D. N.D. N.D.
no phage P4L5 +0.3 -1.0 N.D. N.D. N.D.
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.7 +0.5 N.D. N.D. N.D.
stress R2A with Chloride 700 mM +0.6 -0.6 N.D. N.D. N.D.
carbon source D-Saccharic potassium salt (C) -0.7 +0.6 N.D. N.D. N.D.
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days -0.7 +0.6 N.D. N.D. N.D.
in planta Plant=Sorghum_X54_243; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.7 +0.7 N.D. N.D. N.D.
phage AgroPhage_D10 -0.3 +1.0 N.D. N.D. N.D.
phage AgroPhage_F10 -0.2 +1.0 N.D. N.D. N.D.
phage AgroPhage_D04 +0.2 +1.0 N.D. N.D. N.D.
stress R2A with Ceftazidime 4 mM +0.5 +0.9 N.D. N.D. N.D.
phage AgroPhage_E10 +0.5 +1.4 N.D. N.D. N.D.
stress R2A with Vancomycin 0.009 mM +0.4 +1.6 N.D. N.D. N.D.
stress R2A with Vancomycin 0.009 mM +0.7 +1.6 N.D. N.D. N.D.
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