Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu1166 and Atu8148 are separated by 2 nucleotidesAtu8148 and Atu1169 overlap by 1 nucleotidesAtu1169 and Atu1170 are separated by 293 nucleotidesAtu1170 and Atu1171 are separated by 176 nucleotides Atu1166: Atu1166 - hypothetical protein, at 1,161,411 to 1,161,890 Atu1166 Atu8148: Atu8148 - bifunctional riboflavin deaminase-reductase, at 1,161,893 to 1,163,137 Atu8148 Atu1169: Atu1169 - riboflavin synthase alpha chain, at 1,163,137 to 1,163,748 Atu1169 Atu1170: Atu1170 - RhtB family transporter, at 1,164,042 to 1,164,674 Atu1170 Atu1171: Atu1171 - riboflavin synthase beta chain, at 1,164,851 to 1,165,297 Atu1171
Group Condition Atu1166 Atu8148 Atu1169 Atu1170 Atu1171
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. N.D. N.D. -0.8 N.D.
in planta Plant=Sorghum_Btx_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. N.D. N.D. -0.6 N.D.
carbon source L-Alanine (C) N.D. N.D. N.D. -0.6 N.D.
phage AgroPhage_F10 N.D. N.D. N.D. -0.6 N.D.
carbon source Cellohexaose (C) N.D. N.D. N.D. -0.6 N.D.
in planta Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. N.D. N.D. -0.5 N.D.
phage AgroPhage_H03 N.D. N.D. N.D. -0.5 N.D.
in planta Plant=Sorghum_Btx_642; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. N.D. N.D. -0.5 N.D.
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI N.D. N.D. N.D. -0.5 N.D.
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant N.D. N.D. N.D. -0.5 N.D.
in planta Plant=Sorghum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days N.D. N.D. N.D. -0.5 N.D.
carbon source D-Xylose (C) N.D. N.D. N.D. -0.5 N.D.
in planta Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days N.D. N.D. N.D. +0.5 N.D.
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days N.D. N.D. N.D. +0.5 N.D.
nitrogen source L-Arginine (N) N.D. N.D. N.D. +0.5 N.D.
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct N.D. N.D. N.D. +0.5 N.D.
stress R2A with silver chloride 5 mM N.D. N.D. N.D. +0.5 N.D.
carbon source methyl-beta-L-arabinopyranoside (C) N.D. N.D. N.D. +0.5 N.D.
stress tannic 1 mM N.D. N.D. N.D. +0.5 N.D.
stress Nerol 1.25 mM N.D. N.D. N.D. +0.5 N.D.
carbon source methyl-alpha-D-xylopyranoside (C) N.D. N.D. N.D. +0.5 N.D.
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days N.D. N.D. N.D. +0.6 N.D.
carbon source 2-6-dihydroxybenzoic (C) N.D. N.D. N.D. +0.6 N.D.
stress Pyrogallol 0.5 mM N.D. N.D. N.D. +0.6 N.D.
in planta Plant=Sorghum_SS_20; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. N.D. N.D. +0.6 N.D.
phage AgroPhage_H10 N.D. N.D. N.D. +0.6 N.D.
in planta Plant=Sorghum_X54_243; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. N.D. N.D. +0.6 N.D.
phage AgroPhage_D04 N.D. N.D. N.D. +0.7 N.D.
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct N.D. N.D. N.D. +0.8 N.D.
nitrogen source DL-2-Aminobutyric (N) N.D. N.D. N.D. +0.9 N.D.
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