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Fitness for 5 genes in
Agrobacterium fabrum C58
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Atu1163 and Atu1164 are separated by 373 nucleotides
Atu1164 and Atu1165 are separated by 354 nucleotides
Atu1165 and Atu1166 are separated by 12 nucleotides
Atu1166 and Atu8148 are separated by 2 nucleotides
Atu1163: Atu1163 - exopolysaccharide II synthesis transcriptional activator ExpG, at 1,157,537 to 1,158,049
Atu1163
Atu1164: Atu1164 - hypothetical protein, at 1,158,423 to 1,159,754
Atu1164
Atu1165: Atu1165 - serine hydroxymethyltransferase, at 1,160,109 to 1,161,398
Atu1165
Atu1166: Atu1166 - hypothetical protein, at 1,161,411 to 1,161,890
Atu1166
Atu8148: Atu8148 - bifunctional riboflavin deaminase-reductase, at 1,161,893 to 1,163,137
Atu8148
Group
Condition
Atu1163
Atu1164
Atu1165
Atu1166
Atu8148
in planta
Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days
-2.9
-0.7
N.D.
N.D.
N.D.
stress
R2A with Chloride 700 mM
-3.2
-0.4
N.D.
N.D.
N.D.
in planta
Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days
-3.0
-0.6
N.D.
N.D.
N.D.
stress
R2A with Aluminum chloride 0.3 mM
-3.6
+0.0
N.D.
N.D.
N.D.
carbon source
L-Sorbose (C)
-3.0
-0.4
N.D.
N.D.
N.D.
in planta
Plant=Sorghum_NK_300; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct
-2.8
-0.6
N.D.
N.D.
N.D.
in planta
Plant=Sorghum_Btx_642; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct
-2.5
-0.8
N.D.
N.D.
N.D.
in planta
Plant=Sorghum_Btx_642; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct
-2.7
-0.5
N.D.
N.D.
N.D.
in planta
Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct
-2.6
-0.7
N.D.
N.D.
N.D.
in planta
Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct
-2.9
-0.3
N.D.
N.D.
N.D.
in planta
Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct
-2.6
-0.5
N.D.
N.D.
N.D.
in planta
Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days
-2.8
-0.3
N.D.
N.D.
N.D.
in planta
Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days
-2.9
-0.3
N.D.
N.D.
N.D.
in planta
Plant=Sorghum_NK_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct
-2.7
-0.5
N.D.
N.D.
N.D.
in planta
Plant=Sorghum_NK_300; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct
-2.6
-0.5
N.D.
N.D.
N.D.
in planta
Plant=Sorghum_X54_243; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct
-2.6
-0.5
N.D.
N.D.
N.D.
in planta
Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days
-2.9
-0.2
N.D.
N.D.
N.D.
in planta
Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct
-2.7
-0.4
N.D.
N.D.
N.D.
stress
R2A with Chloride 700 mM
-3.0
-0.1
N.D.
N.D.
N.D.
in planta
Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct
-2.4
-0.7
N.D.
N.D.
N.D.
in planta
Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days
-2.5
-0.6
N.D.
N.D.
N.D.
in planta
Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct
-2.5
-0.5
N.D.
N.D.
N.D.
stress
R2A with Ceftazidime 4 mM
-2.4
+1.0
N.D.
N.D.
N.D.
stress
R2A with Vancomycin 0.009 mM
-3.1
+4.0
N.D.
N.D.
N.D.
stress
R2A with Vancomycin 0.009 mM
-2.6
+4.8
N.D.
N.D.
N.D.
phage
AgroPhage_D04
+2.3
+0.9
N.D.
N.D.
N.D.
phage
AgroPhage_D10
+2.3
+0.9
N.D.
N.D.
N.D.
phage
AgroPhage_F04
+2.6
+0.7
N.D.
N.D.
N.D.
phage
AgroPhage_E04
+2.9
+0.8
N.D.
N.D.
N.D.
phage
AgroPhage_E10
+3.5
+0.5
N.D.
N.D.
N.D.
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