Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu1151 and Atu1152 are separated by 82 nucleotidesAtu1152 and Atu1153 are separated by 180 nucleotidesAtu1153 and Atu1154 are separated by 2 nucleotidesAtu1154 and Atu1155 are separated by 312 nucleotides Atu1151: Atu1151 - ribonuclease D, at 1,142,006 to 1,143,172 Atu1151 Atu1152: Atu1152 - MFS permease, at 1,143,255 to 1,144,544 Atu1152 Atu1153: Atu1153 - aspartyl-tRNA synthetase, at 1,144,725 to 1,146,512 Atu1153 Atu1154: Atu1154 - hypothetical protein, at 1,146,515 to 1,146,991 Atu1154 Atu1155: Atu1155 - hypothetical protein, at 1,147,304 to 1,148,689 Atu1155
Group Condition Atu1151 Atu1152 Atu1153 Atu1154 Atu1155
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. -0.2 N.D. -1.7 +0.0
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct N.D. +0.0 N.D. -1.2 +0.1
phage AgroPhage_E10 N.D. -0.1 N.D. -0.4 -0.4
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. -0.0 N.D. -0.7 -0.1
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. +0.1 N.D. -0.8 -0.0
carbon source D-Sorbitol (C) N.D. -0.1 N.D. -0.7 +0.1
phage phage 99.2 N.D. +0.1 N.D. -0.8 +0.2
in planta Plant=Sorghum_X54_243; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. -0.0 N.D. -0.8 +0.3
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days N.D. +0.1 N.D. -0.6 +0.1
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant N.D. +0.2 N.D. -0.9 +0.2
phage phage 95.1 N.D. +0.2 N.D. -0.4 +0.4
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct N.D. -0.0 N.D. +0.6 -0.4
nitrogen source DL-2-Aminobutyric (N) N.D. +0.5 N.D. -0.6 +0.5
in planta Plant=Sorghum_Btx_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. -0.1 N.D. +0.8 -0.1
in planta Plant=Sorghum_Btx_642; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. -0.2 N.D. +0.3 +0.5
stress R2A with Cefoxitin 0.008 mM N.D. +0.1 N.D. +0.7 -0.1
phage Phage 95.3 + bacteria N.D. +0.2 N.D. +0.5 -0.1
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct N.D. -0.3 N.D. +0.8 +0.3
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Cocuture=C58C1OD0.075 N.D. +0.1 N.D. +0.5 +0.3
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct N.D. -0.0 N.D. +0.7 +0.2
in planta Plant=Sorghum_NK_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. +0.1 N.D. +0.6 +0.2
in planta Plant=Sorghum_X54_243; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. +0.1 N.D. +0.9 -0.1
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days N.D. +0.3 N.D. +0.4 +0.2
stress syringaldehyde 1.25 mM N.D. +0.1 N.D. +0.6 +0.2
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. +0.0 N.D. +1.0 -0.1
in planta Plant=Lettuce; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days N.D. +0.3 N.D. +0.4 +0.3
in planta Plant=Lettuce; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days N.D. +0.4 N.D. +0.4 +0.2
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days N.D. -0.0 N.D. +0.9 +0.2
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days N.D. +0.3 N.D. +0.5 +0.3
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days N.D. +0.2 N.D. +0.9 +0.1
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