Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu1135 and Atu1136 are separated by 107 nucleotidesAtu1136 and Atu1137 are separated by 58 nucleotidesAtu1137 and Atu1138 are separated by 156 nucleotidesAtu1138 and Atu1139 are separated by 108 nucleotides Atu1135: Atu1135 - hypothetical protein, at 1,123,914 to 1,124,777 Atu1135 Atu1136: Atu1136 - reductase, at 1,124,885 to 1,127,041 Atu1136 Atu1137: Atu1137 - NTP pyrophosphohydrolase, MutT family, at 1,127,100 to 1,127,729 Atu1137 Atu1138: Atu1138 - protease VII precursor, at 1,127,886 to 1,128,242 Atu1138 Atu1139: Atu1139 - hypothetical protein, at 1,128,351 to 1,128,821 Atu1139
Group Condition Atu1135 Atu1136 Atu1137 Atu1138 Atu1139
stress R2A with hypochlorite 6.25 mM -0.2 -1.3 +0.2 -0.4 +0.2
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.2 -0.3 -0.3 +0.5 -0.5
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.2 +0.1 -0.7 +0.3 -0.1
in planta Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.1 -0.0 -0.2 +0.5 -0.5
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.2 -0.1 -0.2 -0.2 +0.6
nitrogen source DL-2-Aminobutyric (N) +0.3 -0.1 -0.8 -0.1 +0.4
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.1 +0.1 -0.2 +0.7 -0.6
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.2 +0.1 +0.6 -0.3 -0.7
stress R2A with Chlorate 400 mM -0.2 +0.6 +0.1 -0.4 -0.1
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.1 +0.2 -0.3 -0.4 +0.4
stress R2A with Vancomycin 0.009 mM -0.5 +0.0 +0.5 +0.1 +0.2
phage AgroPhage_C10 +0.1 +0.0 +0.6 -0.0 -0.5
in planta Plant=Sorghum_SS_20; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.3 -0.0 +0.5 -0.1 -0.4
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.2 -0.1 -0.2 +0.5 +0.5
phage AgroPhage_B07 +0.2 +0.0 +0.4 -0.3 +0.4
stress R2A with bromate 5 mM -0.1 +1.0 +0.2 -0.2 -0.2
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.1 +0.0 +1.1 -0.0 -0.4
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.1 +0.4 +0.3 -0.5 +0.7
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.2 +0.0 -0.3 +0.7 +0.3
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.4 +0.3 +0.4 +0.4 +0.2
stress R2A with bromate 5 mM -0.1 +1.1 -0.1 +0.0 +0.1
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.1 +0.2 -0.1 +0.0 +1.0
in planta Plant=Sorghum_NK_300; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.1 +0.2 +0.3 +0.1 +0.6
lb LB -0.1 +0.1 +0.7 -0.0 +0.5
lb_tobacco_leaf LB_Tobacco_Leaf -0.0 +0.1 +0.6 +0.2 +0.3
nophagecontrol No phage control -0.1 -0.0 +0.4 +0.3 +0.6
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.2 -0.0 +0.4 +0.3 +0.7
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.3 +0.2 +0.4 +0.3 +0.3
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.0 -0.0 -0.1 +0.9 +1.1
in planta Plant=Sorghum_X54_243; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.1 +0.1 +1.2 +0.0 +0.4
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