Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu1134 and Atu1135 are separated by 4 nucleotidesAtu1135 and Atu1136 are separated by 107 nucleotidesAtu1136 and Atu1137 are separated by 58 nucleotidesAtu1137 and Atu1138 are separated by 156 nucleotides Atu1134: Atu1134 - hypothetical protein, at 1,122,962 to 1,123,909 Atu1134 Atu1135: Atu1135 - hypothetical protein, at 1,123,914 to 1,124,777 Atu1135 Atu1136: Atu1136 - reductase, at 1,124,885 to 1,127,041 Atu1136 Atu1137: Atu1137 - NTP pyrophosphohydrolase, MutT family, at 1,127,100 to 1,127,729 Atu1137 Atu1138: Atu1138 - protease VII precursor, at 1,127,886 to 1,128,242 Atu1138
Group Condition Atu1134 Atu1135 Atu1136 Atu1137 Atu1138
stress R2A with hypochlorite 6.25 mM -0.2 -0.2 -1.3 +0.2 -0.4
carbon source L-ascorbate (C) -1.7 +0.1 +0.1 +0.2 +0.0
stress Dodecyl Sulfate 0.2 mM -1.1 -0.2 +0.1 +0.1 -0.2
stress R2A with Polymyxin B sulfate 0.00075 mM -1.2 -0.1 +0.2 +0.0 -0.1
phage Phage 100.1 + bacteria -0.8 -0.0 +0.2 -0.3 -0.3
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.6 +0.0 +0.3 -0.2 -0.3
carbon source L-ascorbate (C) -1.2 -0.0 +0.1 +0.2 +0.2
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.5 -0.2 -0.1 -0.2 +0.5
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.4 +0.2 +0.1 -0.7 +0.3
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.9 +0.2 -0.0 +0.2 +0.1
in planta Plant=Sorghum_Btx_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.4 -0.1 -0.3 +0.2 +0.3
nitrogen source DL-2-Aminobutyric (N) +0.5 +0.3 -0.1 -0.8 -0.1
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.2 -0.2 -0.3 -0.3 +0.5
stress R2A with Tetracycline 0.002 mM +0.8 -0.1 -0.0 -0.3 -0.4
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.4 +0.2 +0.0 -0.3 +0.7
stress R2A with Chlorate 400 mM +0.2 -0.2 +0.6 +0.1 -0.4
in planta Plant=Cucumber; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.3 -0.2 +0.1 +0.3 +0.5
in planta Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.7 -0.1 +0.0 -0.4 +0.2
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.1 -0.4 +0.3 +0.4 +0.4
phage AgroPhage_B07 +0.6 +0.2 +0.0 +0.4 -0.3
stress R2A with bromate 5 mM +0.1 -0.1 +1.0 +0.2 -0.2
stress R2A with bromate 5 mM +0.2 -0.1 +1.1 -0.1 +0.0
stress R2A with Ticarcillin 0.01 mM +0.9 -0.1 +0.1 +0.2 +0.1
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.6 +0.2 -0.0 +0.4 +0.3
stress R2A with Tetracycline 0.002 mM +1.0 +0.1 -0.1 +0.0 +0.4
stress R2A with Ceftazidime 4 mM +1.3 -0.2 +0.0 +0.2 +0.2
stress R2A with Ceftazidime 4 mM +1.5 -0.1 +0.1 +0.3 -0.1
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.5 +0.1 +0.0 +1.1 -0.0
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.4 +0.3 +0.2 +0.4 +0.3
in planta Plant=Sorghum_X54_243; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.5 +0.1 +0.1 +1.2 +0.0
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