Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu1093 and Atu1094 are separated by 169 nucleotidesAtu1094 and Atu1095 are separated by 78 nucleotidesAtu1095 and Atu1096 are separated by 351 nucleotidesAtu1096 and Atu1097 are separated by 251 nucleotides Atu1093: Atu1093 - aldo/keto reductase, at 1,082,770 to 1,083,813 Atu1093 Atu1094: Atu1094 - malonyl-CoA:acyl carrier protein transacylase, at 1,083,983 to 1,084,978 Atu1094 Atu1095: Atu1095 - 3-oxoacyl-(acyl carrier protein) reductase, at 1,085,057 to 1,085,794 Atu1095 Atu1096: Atu1096 - acyl carrier protein, at 1,086,146 to 1,086,382 Atu1096 Atu1097: Atu1097 - 3-oxoacyl-(acyl carrier protein) synthase II, at 1,086,634 to 1,087,896 Atu1097
Group Condition Atu1093 Atu1094 Atu1095 Atu1096 Atu1097
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.5 N.D. N.D. N.D. N.D.
in planta Plant=Sorghum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.4 N.D. N.D. N.D. N.D.
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.4 N.D. N.D. N.D. N.D.
carbon source D-Sorbitol (C) -0.3 N.D. N.D. N.D. N.D.
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.3 N.D. N.D. N.D. N.D.
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.3 N.D. N.D. N.D. N.D.
in planta Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.3 N.D. N.D. N.D. N.D.
in planta Plant=Sorghum_Btx_642; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.2 N.D. N.D. N.D. N.D.
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.2 N.D. N.D. N.D. N.D.
carbon source Melibiose (C) -0.2 N.D. N.D. N.D. N.D.
stress R2A with m-arsenite 0.8 mM -0.2 N.D. N.D. N.D. N.D.
carbon source Xylobiose (C) -0.2 N.D. N.D. N.D. N.D.
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Cocuture=C58C1OD2.0 -0.2 N.D. N.D. N.D. N.D.
in planta Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.2 N.D. N.D. N.D. N.D.
carbon source D-Glucose-6-Phosphate (C) -0.2 N.D. N.D. N.D. N.D.
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.2 N.D. N.D. N.D. N.D.
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.2 N.D. N.D. N.D. N.D.
phage Phage 95.3 + bacteria +0.2 N.D. N.D. N.D. N.D.
carbon source anthranilamide (C) +0.2 N.D. N.D. N.D. N.D.
carbon source Lactitol (C) +0.2 N.D. N.D. N.D. N.D.
in planta Plant=Sorghum_NK_300; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.2 N.D. N.D. N.D. N.D.
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days +0.2 N.D. N.D. N.D. N.D.
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.2 N.D. N.D. N.D. N.D.
phage Phage 100.1 + bacteria +0.2 N.D. N.D. N.D. N.D.
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.2 N.D. N.D. N.D. N.D.
phage AgroPhage_C10 +0.3 N.D. N.D. N.D. N.D.
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days +0.3 N.D. N.D. N.D. N.D.
stress R2A with Vancomycin 0.009 mM +0.3 N.D. N.D. N.D. N.D.
phage AgroPhage_F04 +0.3 N.D. N.D. N.D. N.D.
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.4 N.D. N.D. N.D. N.D.
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