Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu1089 and Atu1090 are separated by 146 nucleotidesAtu1090 and Atu1091 are separated by 13 nucleotidesAtu1091 and Atu1092 are separated by 7 nucleotidesAtu1092 and Atu1093 are separated by 5 nucleotides Atu1089: Atu1089 - hypothetical protein, at 1,080,634 to 1,081,608 Atu1089 Atu1090: Atu1090 - 30S ribosomal protein S18, at 1,081,755 to 1,082,003 Atu1090 Atu1091: Atu1091 - 30S ribosomal protein S6, at 1,082,017 to 1,082,478 Atu1091 Atu1092: Atu1092 - hypothetical protein, at 1,082,486 to 1,082,764 Atu1092 Atu1093: Atu1093 - aldo/keto reductase, at 1,082,770 to 1,083,813 Atu1093
Group Condition Atu1089 Atu1090 Atu1091 Atu1092 Atu1093
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct N.D. N.D. N.D. N.D. -0.5
in planta Plant=Sorghum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days N.D. N.D. N.D. N.D. -0.4
agar plate interaction control Parafilmed volatile agar plate with no fungus N.D. N.D. N.D. N.D. -0.4
carbon source D-Sorbitol (C) N.D. N.D. N.D. N.D. -0.3
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI N.D. N.D. N.D. N.D. -0.3
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct N.D. N.D. N.D. N.D. -0.3
in planta Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. N.D. N.D. N.D. -0.3
in planta Plant=Sorghum_Btx_642; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. N.D. N.D. N.D. -0.2
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct N.D. N.D. N.D. N.D. -0.2
carbon source Melibiose (C) N.D. N.D. N.D. N.D. -0.2
stress R2A with m-arsenite 0.8 mM N.D. N.D. N.D. N.D. -0.2
carbon source Xylobiose (C) N.D. N.D. N.D. N.D. -0.2
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Cocuture=C58C1OD2.0 N.D. N.D. N.D. N.D. -0.2
in planta Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. N.D. N.D. N.D. -0.2
carbon source D-Glucose-6-Phosphate (C) N.D. N.D. N.D. N.D. -0.2
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI N.D. N.D. N.D. N.D. +0.2
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. N.D. N.D. N.D. +0.2
phage Phage 95.3 + bacteria N.D. N.D. N.D. N.D. +0.2
carbon source anthranilamide (C) N.D. N.D. N.D. N.D. +0.2
carbon source Lactitol (C) N.D. N.D. N.D. N.D. +0.2
in planta Plant=Sorghum_NK_300; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. N.D. N.D. N.D. +0.2
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days N.D. N.D. N.D. N.D. +0.2
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct N.D. N.D. N.D. N.D. +0.2
phage Phage 100.1 + bacteria N.D. N.D. N.D. N.D. +0.2
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days N.D. N.D. N.D. N.D. +0.2
phage AgroPhage_C10 N.D. N.D. N.D. N.D. +0.3
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days N.D. N.D. N.D. N.D. +0.3
stress R2A with Vancomycin 0.009 mM N.D. N.D. N.D. N.D. +0.3
phage AgroPhage_F04 N.D. N.D. N.D. N.D. +0.3
agar plate interaction control Parafilmed volatile agar plate with no fungus N.D. N.D. N.D. N.D. +0.4
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