Fitness for 5 genes in Agrobacterium fabrum C58

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 1014 experiments or choose conditions or try the comparative fitness browser

500 ntAtu1087 and Atu1088 are separated by 270 nucleotidesAtu1088 and Atu1089 are separated by 14 nucleotidesAtu1089 and Atu1090 are separated by 146 nucleotidesAtu1090 and Atu1091 are separated by 13 nucleotides Atu1087: Atu1087 - secretion protein, at 1,078,706 to 1,079,773 Atu1087 Atu1088: Atu1088 - 50S ribosomal protein L9, at 1,080,044 to 1,080,619 Atu1088 Atu1089: Atu1089 - hypothetical protein, at 1,080,634 to 1,081,608 Atu1089 Atu1090: Atu1090 - 30S ribosomal protein S18, at 1,081,755 to 1,082,003 Atu1090 Atu1091: Atu1091 - 30S ribosomal protein S6, at 1,082,017 to 1,082,478 Atu1091
Group Condition Atu1087 Atu1088 Atu1089 Atu1090 Atu1091
carbon source p-Coumaric (C) -2.8 N.D. N.D. N.D. N.D.
stress 4-Hydroxybenzoic Acid 5 mM -2.5 N.D. N.D. N.D. N.D.
carbon source p-Coumaric (C) -2.5 N.D. N.D. N.D. N.D.
stress Phenoxyacetic 5 mM -2.3 N.D. N.D. N.D. N.D.
stress Phenoxyacetic 5 mM -2.3 N.D. N.D. N.D. N.D.
stress 4-Hydroxybenzoic Acid 5 mM -1.6 N.D. N.D. N.D. N.D.
stress Cinnamic 1.25 mM -1.3 N.D. N.D. N.D. N.D.
stress Indole-3-butyric 5 mM -1.2 N.D. N.D. N.D. N.D.
stress Cinnamic 1.25 mM -1.2 N.D. N.D. N.D. N.D.
stress Indole-3-butyric 5 mM -1.1 N.D. N.D. N.D. N.D.
stress Ferulic Acid 1.25 mM -0.9 N.D. N.D. N.D. N.D.
carbon source Ferulic Acid (C) -0.7 N.D. N.D. N.D. N.D.
carbon source Phloretic Acid (C) -0.7 N.D. N.D. N.D. N.D.
carbon source Phloretic Acid (C) -0.7 N.D. N.D. N.D. N.D.
nitrogen source Hydantoin (N) -0.7 N.D. N.D. N.D. N.D.
stress Salicylic 0.5 mM -0.6 N.D. N.D. N.D. N.D.
stress Ferulic Acid 1.25 mM -0.6 N.D. N.D. N.D. N.D.
nitrogen source Hydantoin (N) -0.5 N.D. N.D. N.D. N.D.
Atjh15 -0.5 N.D. N.D. N.D. N.D.
stress p-Coumaric 1.25 mM -0.5 N.D. N.D. N.D. N.D.
nophagecontrol No phage control +0.4 N.D. N.D. N.D. N.D.
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.5 N.D. N.D. N.D. N.D.
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.5 N.D. N.D. N.D. N.D.
in planta Plant=Sorghum_X54_243; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.5 N.D. N.D. N.D. N.D.
carbon source L-ascorbate (C) +0.5 N.D. N.D. N.D. N.D.
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.5 N.D. N.D. N.D. N.D.
in planta Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.6 N.D. N.D. N.D. N.D.
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.6 N.D. N.D. N.D. N.D.
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days +0.6 N.D. N.D. N.D. N.D.
carbon source L-ascorbate (C) +0.9 N.D. N.D. N.D. N.D.
remove
Atu1087
plot		 remove
Atu1088
plot		 remove
Atu1089		 remove
Atu1090
plot		 remove
Atu1091
plot